Semi-automated pulmonary nodule interval segmentation using the NLST data

被引:14
|
作者
Balagurunathan, Yoganand [1 ]
Beers, Andrew [2 ]
Kalpathy-Cramer, Jayashree [2 ]
McNitt-Gray, Michael [3 ]
Hadjiiski, Lubomir [4 ]
Zhao, Bensheng [5 ]
Zhu, Jiangguo [5 ]
Yang, Hao [5 ]
Yip, Stephen S. F. [6 ,7 ,8 ]
Aerts, Hugo J. W. L. [6 ,7 ,8 ]
Napel, Sandy [9 ]
Cherezov, Dmitrii [1 ,10 ]
Cha, Kenny [4 ]
Chan, Heang-Ping [4 ]
Flores, Carlos [3 ]
Garcia, Alberto [1 ]
Gillies, Robert [1 ]
Goldgof, Dmitry [1 ,10 ]
机构
[1] HL Moffitt Canc Ctr MCC, Tampa, FL 33612 USA
[2] Massachusetts Gen Hosp, Boston, MA 02114 USA
[3] Univ Calif Los Angeles, Los Angeles, CA USA
[4] Univ Michigan, Ann Arbor, MI 48109 USA
[5] Columbia Univ CUMU, New York, NY USA
[6] Brigham & Womens Hosp, Dana Farber Canc Inst, Radiat Oncol, 75 Francis St, Boston, MA 02115 USA
[7] Harvard Med Sch HMC, Boston, MA USA
[8] Brigham & Womens Hosp, Dana Farber Canc Inst, Radiol, 75 Francis St, Boston, MA 02115 USA
[9] Stanford Univ, Stanford, CA 94305 USA
[10] USF, Tampa, FL 33620 USA
关键词
change in volume segmentation; CT lung; lung nodule segmentation; volume estimate; CT SCANS; VOLUME; CANCER;
D O I
10.1002/mp.12766
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
PurposeTo study the variability in volume change estimates of pulmonary nodules due to segmentation approaches used across several algorithms and to evaluate these effects on the ability to predict nodule malignancy. MethodsWe obtained 100 patient image datasets from the National Lung Screening Trial (NLST) that had a nodule detected on each of two consecutive low dose computed tomography (LDCT) scans, with an equal proportion of malignant and benign cases (50 malignant, 50 benign). Information about the nodule location for the cases was provided by a screen capture with a bounding box and its axial location was indicated. Five participating quantitative imaging network (QIN) institutions performed nodule segmentation using their preferred semi-automated algorithms with no manual correction; teams were allowed to provide additional manually corrected segmentations (analyzed separately). The teams were asked to provide segmentation masks for each nodule at both time points. From these masks, the volume was estimated for the nodule at each time point; the change in volume (absolute and percent change) across time points was estimated as well. We used the concordance correlation coefficient (CCC) to compare the similarity of computed nodule volumes (absolute and percent change) across algorithms. We used Logistic regression model on the change in volume (absolute change and percent change) of the nodules to predict the malignancy status, the area under the receiver operating characteristic curve (AUROC) and confidence intervals were reported. Because the size of nodules was expected to have a substantial effect on segmentation variability, analysis of change in volumes was stratified by lesion size, where lesions were grouped into those with a longest diameter of <8mm and those with longest diameter 8mm. ResultsWe find that segmentation of the nodules shows substantial variability across algorithms, with the CCC ranging from 0.56 to 0.95 for change in volume (percent change in volume range was [0.15 to 0.86]) across the nodules. When examining nodules based on their longest diameter, we find the CCC had higher values for large nodules with a range of [0.54 to 0.93] among the algorithms, while percent change in volume was [0.3 to 0.95]. Compared to that of smaller nodules which had a range of [-0.0038 to 0.69] and percent change in volume was [-0.039 to 0.92]. The malignancy prediction results showed fairly consistent results across the institutions, the AUC using change in volume ranged from 0.65 to 0.89 (Percent change in volume was 0.64 to 0.86) for entire nodule range. Prediction improves for large nodule range (8mm) with AUC range 0.75 to 0.90 (percent change in volume was 0.74 to 0.92). Compared to smaller nodule range (<8mm) with AUC range 0.57 to 0.78 (percent change in volume was 0.59 to 0.77). ConclusionsWe find there is a fairly high concordance in the size measurements for larger nodules (8mm) than the lower sizes (<8mm) across algorithms. We find the change in nodule volume (absolute and percent change) were consistent predictors of malignancy across institutions, despite using different segmentation algorithms. Using volume change estimates without corrections shows slightly lower predictability (for two teams).
引用
收藏
页码:1093 / 1107
页数:15
相关论文
共 50 条
  • [1] Semi-automated pulmonary nodule interval segmentation using the NLST data (vol 45, pg 1093, 2018)
    Balagurunathan, Yoganand
    Beers, Andrew
    Kalpathy-Cramer, Jayashree
    McNitt-Gray, Michael
    Hadjiiski, Lubomir
    Zhao, Bensheng
    Zhu, Jianguo
    Yang, Hao
    Yip, Stephen S. F.
    Aerts, Hugo J. W. L.
    Napel, Sandy
    Cherezov, Dmitrii
    Cha, Kenny
    Chan, Heang-Ping
    Flores, Carlos
    Garcia, Alberto
    Gillies, Robert
    Goldgof, Dmitry
    MEDICAL PHYSICS, 2018, 45 (06) : 2689 - 2690
  • [2] SEMI-AUTOMATED MEASUREMENT OF PULMONARY NODULE GROWTH WITHOUT EXPLICIT SEGMENTATION
    Jirapatnakul, A. C.
    Reeves, A. P.
    Biancardi, A. M.
    Yankelevitz, D. F.
    Henschke, C. I.
    2009 IEEE INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING: FROM NANO TO MACRO, VOLS 1 AND 2, 2009, : 855 - +
  • [3] An unsupervised semi-automated pulmonary nodule segmentation method based on enhanced region growing
    Ren, He
    Zhou, Lingxiao
    Liu, Gang
    Peng, Xueqing
    Shi, Weiya
    Xu, Huilin
    Shan, Fei
    Liu, Lei
    QUANTITATIVE IMAGING IN MEDICINE AND SURGERY, 2020, 10 (01) : 233 - +
  • [4] Semi-automated brain tumor and edema segmentation using MRI
    Xie, K
    Yang, J
    Zhang, ZG
    Zhu, YM
    EUROPEAN JOURNAL OF RADIOLOGY, 2005, 56 (01) : 12 - 19
  • [5] Semi-automated segmentation of ONH tissues using deep learning
    Clingo, Kelly A.
    Czerpak, Cameron A.
    Quigley, Harry A.
    Nguyen, Thao D.
    INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2024, 65 (07)
  • [6] Boundary Correction in Semi-Automated Segmentation Using Scribbling Method
    Rosidi, Rasyiqah Annani Mohd
    Khaizi, Aida Syafiqah Ahmad
    Gan, Hong-Seng
    Basarudin, Hafiz
    2017 INTERNATIONAL CONFERENCE ON ENGINEERING TECHNOLOGY AND TECHNOPRENEURSHIP (ICE2T), 2017,
  • [7] SEMI-AUTOMATED LIVER CT SEGMENTATION USING LAPLACIAN MESHES
    Chartrand, G.
    Cresson, T.
    Chav, R.
    Gotra, A.
    Tang, A.
    DeGuise, I.
    2014 IEEE 11TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI), 2014, : 641 - 644
  • [8] Semi-Automated Data Labeling
    Desmond, Michael
    Duesterwald, Evelyn
    Brimijoin, Kristina
    Brachman, Michelle
    Pan, Qian
    NEURIPS 2020 COMPETITION AND DEMONSTRATION TRACK, VOL 133, 2020, 133 : 156 - 169
  • [9] Semi-automated segmentation of microbes in color images
    Reddy, CK
    Liu, FI
    Dazzo, FB
    COLOR IMAGING VIII: PROCESSING, HARDCOPY, AND APPLICATIONS, 2003, 5008 : 548 - 559
  • [10] Semi-automated color segmentation of anatomical tissue
    Imelinska, C
    Downes, MS
    Yuan, W
    COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 2000, 24 (03) : 173 - 180