Identification and Characterization of an Irreversible Inhibitor of CDK2

被引:87
作者
Anscombe, Elizabeth [1 ]
Meschini, Elisa [2 ]
Mora-Vidal, Regina [3 ]
Martin, Mathew P. [3 ]
Staunton, David [1 ]
Geitmann, Matthis [4 ]
Danielson, U. Helena [4 ]
Stanley, Will A. [3 ]
Wang, Lan Z. [3 ]
Reuillon, Tristan [2 ]
Golding, Bernard T. [2 ]
Cano, Celine [2 ]
Newell, David R. [3 ]
Noble, Martin E. M. [1 ]
Wedge, Stephen R. [3 ]
Endicott, Jane A. [1 ]
Griffin, Roger J. [2 ]
机构
[1] Univ Oxford, Dept Biochem, Oxford OX1 3QU, England
[2] Newcastle Univ, Sch Chem, Northern Inst Canc Res, Newcastle Canc Ctr, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England
[3] Newcastle Univ, Newcastle Canc Ctr, Northern Inst Canc Res, Sch Med, Newcastle Upon Tyne NE2 4HH, Tyne & Wear, England
[4] Uppsala Univ, Dept Chem BMC, S-75123 Uppsala, Sweden
来源
CHEMISTRY & BIOLOGY | 2015年 / 22卷 / 09期
基金
英国医学研究理事会; 瑞典研究理事会;
关键词
PROTEIN-KINASE INHIBITORS; SYNTHETIC LETHALITY; CELL-CYCLE; CANCER; POTENT;
D O I
10.1016/j.chembiol.2015.07.018
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Irreversible inhibitors that modify cysteine or lysine residues within a protein kinase ATP binding site offer, through their distinctive mode of action, an alternative to ATP-competitive agents. 4-((6-(Cyclo-hexylmethoxy)-9H-purin-2-yl) amino) benzenesulfonamide (NU6102) is a potent and selective ATP-competitive inhibitor of CDK2 in which the sulfonamide moiety is positioned close to a pair of lysine residues. Guided by the CDK2/NU6102 structure, we designed 6-(cyclohexylmethoxy)-N-(4-(vinylsulfonyl) phenyl)-9H- purin-2-amine (NU6300), which binds covalently to CDK2 as shown by a co-complex crystal structure. Acute incubation with NU6300 produced a durable inhibition of Rb phosphorylation in SKUT-1B cells, consistent with it acting as an irreversible CDK2 inhibitor. NU6300 is the first covalent CDK2 inhibitor to be described, and illustrates the potential of vinyl sulfones for the design of more potent and selective compounds.
引用
收藏
页码:1159 / 1164
页数:6
相关论文
共 25 条
[1]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[2]   Irreversible Protein Kinase Inhibitors: Balancing the Benefits and Risks [J].
Barf, Tjeerd ;
Kaptein, Allard .
JOURNAL OF MEDICINAL CHEMISTRY, 2012, 55 (14) :6243-6262
[3]   The structural basis for specificity of substrate and recruitment peptides for cyclin-dependent kinases [J].
Brown, NR ;
Noble, MEM ;
Endicott, JA ;
Johnson, LN .
NATURE CELL BIOLOGY, 1999, 1 (07) :438-443
[4]   Dual blockade of lipid and cyclin-dependent kinases induces synthetic lethality in malignant glioma [J].
Cheng, Christine K. ;
Gustafson, W. Clay ;
Charron, Elizabeth ;
Houseman, Benjamin T. ;
Zunder, Eli ;
Goga, Andrei ;
Gray, Nathanael S. ;
Pollok, Brian ;
Oakes, Scott A. ;
James, C. David ;
Shokat, Kevan M. ;
Weiss, William A. ;
Fan, Qi-Wen .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (31) :12722-12727
[5]   The Evolution of Protein Kinase Inhibitors from Antagonists to Agonists of Cellular Signaling [J].
Dar, Arvin C. ;
Shokat, Kevan M. .
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 80, 2011, 80 :769-795
[6]   Structure-based design of a potent purine-based cyclin-dependent kinase inhibitor [J].
Davies, TG ;
Bentley, J ;
Arris, CE ;
Boyle, FT ;
Curtin, NJ ;
Endicott, JA ;
Gibson, AE ;
Golding, BT ;
Griffin, RJ ;
Hardcastle, IR ;
Jewsbury, P ;
Johnson, LN ;
Mesguiche, V ;
Newell, DR ;
Noble, MEM ;
Tucker, JA ;
Wang, L ;
Whitfield, HJ .
NATURE STRUCTURAL BIOLOGY, 2002, 9 (10) :745-749
[7]   Features and development of Coot [J].
Emsley, P. ;
Lohkamp, B. ;
Scott, W. G. ;
Cowtan, K. .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2010, 66 :486-501
[8]   Synthetic lethality between CCNE1 amplification and loss of BRCA1 [J].
Etemadmoghadam, Dariush ;
Weir, Barbara A. ;
Au-Yeung, George ;
Alsop, Kathryn ;
Mitchell, Gillian ;
George, Joshy ;
Davis, Sally ;
D'Andrea, Alan D. ;
Simpson, Kaylene ;
Hahn, William C. ;
Bowtell, David D. L. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (48) :19489-19494
[9]   Searching for cyclin-dependent kinase inhibitors using a new variant of the cope elimination [J].
Griffin, Roger J. ;
Henderson, Andrew ;
Curtin, Nicola J. ;
Echalier, Aude ;
Endicott, Jane A. ;
Hardcastle, Ian R. ;
Newell, David R. ;
Noble, Martin E. M. ;
Wang, Lan-Zhen ;
Golding, Bernard T. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (18) :6012-6013
[10]   Cyclin-dependent kinase inhibitors move into Phase III [J].
Guha, Malini .
NATURE REVIEWS DRUG DISCOVERY, 2012, 11 (12) :892-894