Exploring Electron/Proton Transfer and Conformational Changes in the Nitrogenase MoFe Protein and FeMo-cofactor Through Cryoreduction/EPR Measurements

被引:12
|
作者
Davydov, Roman [1 ]
Khadka, Nimesh [2 ]
Yang, Zhi-Yong [2 ]
Fielding, Andrew J. [2 ]
Lukoyanov, Dmitriy [1 ]
Dean, Dennis R. [3 ]
Seefeldt, Lance C. [2 ]
Hoffman, Brian M. [1 ]
机构
[1] Northwestern Univ, Dept Chem, 2145 Sheridan Rd, Evanston, IL 60208 USA
[2] Utah State Univ, Dept Chem & Biochem, Logan, UT 84322 USA
[3] Virginia Tech, Dept Biochem, 110 Fralin Hall, Blacksburg, VA 24061 USA
关键词
conformation analysis; electron transfer; enzyme catalysis; EPR spectroscopy; proton transfer; AZOTOBACTER-VINELANDII NITROGENASE; IRON-MOLYBDENUM COFACTOR; PARAMAGNETIC-RESONANCE; N-2; REDUCTION; RELAXATION PROTOCOL; KINETIC SCHEME; MECHANISM; INTERMEDIATE; CATALYSIS; BINDING;
D O I
10.1002/ijch.201600026
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
We combine cryoreduction/annealing/EPR measurements of nitrogenase MoFe protein with results of earlier investigations to provide a detailed view of the electron/proton transfer events and conformational changes that occur during early stages of [e(-)/H+] accumulation by the MoFe protein. This includes reduction of: 1) the non-catalytic state of the iron-molybdenum cofactor (FeMo-co) active site that is generated by chemical oxidation of the resting-state cofactor (S=3/2) within resting MoFe (E-0); and 2) the catalytic state that has accumulated n=1 [e(-)/H+] above the resting-state level, denoted E-1(1H) (S1) in the Lowe-Thorneley kinetic scheme. FeMo-co does not undergo a major change of conformation during reduction of oxidized FeMo-co. In contrast, FeMo-co undergoes substantial conformational changes during the reduction of E-0 to E-1(1H), and of E-1(1H) to E-2(2H) (S=3/2). The experimental results further suggest that the E-1(1H)E-2(2H) step involves coupled delivery of a proton and an electron (PCET) to FeMo-co of E-1(H) to generate a nonequilibrium S=1/2 form E-2(2H)*. This subsequently undergoes conformational relaxation and attendant change in the FeMo-co spin state, to generate the equilibrium E-2(2H) (S=3/2) state. Unexpectedly, these experiments also reveal conformational coupling between FeMo-co and the P cluster, and between the Fe protein binding and FeMo-co, which might play a role in gated electron transfer from reduced Fe protein to FeMo-co.
引用
收藏
页码:841 / 851
页数:11
相关论文
共 12 条
  • [1] Nitrogenase MoFe-protein at 1.16 Å resolution:: A central ligand in the FeMo-cofactor
    Einsle, O
    Tezcan, FA
    Andrade, SLA
    Schmid, B
    Yoshida, M
    Howard, JB
    Rees, DC
    SCIENCE, 2002, 297 (5587) : 1696 - 1700
  • [2] EXAFS and NRVS Reveal a Conformational Distortion of the FeMo-cofactor in the MoFe Nitrogenase Propargyl Alcohol Complex
    George, Simon J.
    Barney, Brett M.
    Mitra, Devrani
    Igarashi, Robert Y.
    Guo, Yisong
    Dean, Dennis R.
    Cramer, Stephen P.
    Seefeldt, Lance C.
    JOURNAL OF INORGANIC BIOCHEMISTRY, 2012, 112 : 85 - 92
  • [3] ROLE FOR THE NITROGENASE MOFE PROTEIN ALPHA-SUBUNIT IN FEMO-COFACTOR BINDING AND CATALYSIS
    SCOTT, DJ
    MAY, HD
    NEWTON, WE
    BRIGLE, KE
    DEAN, DR
    NATURE, 1990, 343 (6254) : 188 - 190
  • [4] Insights into substrate binding at FeMo-cofactor in nitrogenase from the structure of an α-70Ile MoFe protein variant
    Sarma, Ranjana
    Barney, Brett M.
    Keable, Stephen
    Dean, Dennis R.
    Seefeldt, Lance C.
    Peters, John W.
    JOURNAL OF INORGANIC BIOCHEMISTRY, 2010, 104 (04) : 385 - 389
  • [5] Localization of a substrate binding site on the FeMo-cofactor in nitrogenase:: Trapping propargyl alcohol with an α-70-substituted MoFe protein
    Benton, PMC
    Laryukhin, M
    Mayer, SM
    Hoffman, BM
    Dean, DR
    Seefeldt, LC
    BIOCHEMISTRY, 2003, 42 (30) : 9102 - 9109
  • [6] ROLE OF THE MOFE PROTEIN ALPHA-SUBUNIT HISTIDINE-195 RESIDUE IN FEMO-COFACTOR BINDING AND NITROGENASE CATALYSIS
    KIM, CH
    NEWTON, WE
    DEAN, DR
    BIOCHEMISTRY, 1995, 34 (09) : 2798 - 2808
  • [7] Conformational Gating of Electron Transfer from the Nitrogenase Fe Protein to MoFe Protein
    Danyal, Karamatullah
    Mayweather, Diana
    Dean, Dennis R.
    Seefeldt, Lance C.
    Hoffman, Brian M.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2010, 132 (20) : 6894 - +
  • [9] Q-band ENDOR studies of the nitrogenase MoFe protein under turnover conditions - Substrate-inhibitor-binding to and metal-ion valencies of the FeMo-cofactor
    Lee, HI
    Cameron, LM
    Christiansen, J
    Christie, PD
    Pollock, RC
    Song, R
    Sorlie, M
    Orme-Johnson, WH
    Dean, DR
    Hales, BJ
    Hoffman, BM
    PARAMAGNETIC RESONANCE OF METALLOBIOMOLECULES, 2003, 858 : 150 - 178
  • [10] Exploring the Role of the Central Carbide of the Nitrogenase Active-Site FeMo-cofactor through Targeted 13C Labeling and ENDOR Spectroscopy
    Perez-Gonzalez, Ana
    Yang, Zhi-Yong
    Lukoyanov, Dmitriy A.
    Dean, Dennis R.
    Seefeldt, Lance C.
    Hoffman, Brian M.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2021, 143 (24) : 9183 - 9190