Super-resolution imaging identifies PARP1 and the Ku complex acting as DNA double-strand break sensors

被引:87
作者
Yang, Guang [1 ]
Liu, Chao [1 ]
Chen, Shih-Hsun [1 ]
Kassab, Muzaffer A. [1 ]
Hoff, J. Damon [2 ]
Walter, Nils G. [2 ,3 ,4 ]
Yu, Xiaochun [1 ]
机构
[1] City Hope Natl Med Ctr, Beckman Res Inst, Dept Canc Genet & Epigenet, Duarte, CA 91010 USA
[2] Univ Michigan, Single Mol Anal Real Time SMART Ctr, Ann Arbor, MI 48109 USA
[3] Univ Michigan, Dept Chem, Single Mol Anal Grp, Ann Arbor, MI 48109 USA
[4] Univ Michigan, Dept Chem, Ctr RNA Biomed, Ann Arbor, MI 48109 USA
基金
美国国家卫生研究院;
关键词
POLY ADP-RIBOSYLATION; DAMAGE RESPONSE; POLY(ADP-RIBOSE) POLYMERASE; GENOMIC INSTABILITY; ATM ACTIVATION; REPAIR; RECOMBINATION; CELLS; AUTOANTIBODIES; TUMORIGENESIS;
D O I
10.1093/nar/gky088
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
DNA double-strand breaks (DSBs) are fatal DNA lesions and activate a rapid DNA damage response. However, the earliest stage of DSB sensing remains elusive. Here, we report that PARP1 and the Ku70/80 complex localize to DNA lesions considerably earlier than other DSB sensors. Using super-resolved fluorescent particle tracking, we further examine the relocation kinetics of PARP1 and the Ku70/80 complex to a single DSB, and find that PARP1 and the Ku70/80 complex are recruited to the DSB almost at the same time. Notably, only the Ku70/80 complex occupies the DSB exclusively in the G1 phase; whereas PARP1 competes with the Ku70/80 complex at the DSB in the S/G2 phase. Moreover, in the S/G2 phase, PARP1 removes the Ku70/80 complex through its enzymatic activity, which is further confirmed by in vitro DSB-binding assays. Taken together, our results reveal PARP1 and the Ku70/80 complex as critical DSB sensors, and suggest that PARP1 may function as an important regulator of the Ku70/80 complex at the DSBs in the S/G2 phase.
引用
收藏
页码:3446 / 3457
页数:12
相关论文
共 53 条
  • [1] Poly(ADP-ribose)-Dependent Regulation of DNA Repair by the Chromatin Remodeling Enzyme ALC1
    Ahel, Dragana
    Horejsi, Zuzana
    Wiechens, Nicola
    Polo, Sophie E.
    Garcia-Wilson, Elisa
    Ahel, Ivan
    Flynn, Helen
    Skehel, Mark
    West, Stephen C.
    Jackson, Stephen P.
    Owen-Hughes, Tom
    Boulton, Simon J.
    [J]. SCIENCE, 2009, 325 (5945) : 1240 - 1243
  • [2] Poly(ADP-ribose)-binding zinc finger motifs in DNA repair/checkpoint proteins
    Ahel, Ivan
    Ahel, Dragana
    Matsusaka, Takahiro
    Clark, Allison J.
    Pines, Jonathon
    Boulton, Simon J.
    West, Stephen C.
    [J]. NATURE, 2008, 451 (7174) : 81 - U12
  • [3] The zinc-finger domains of PARP1 cooperate to recognize DNA strand breaks
    Ali, Ammar A. E.
    Timinszky, Gyula
    Arribas-Bosacoma, Raquel
    Kozlowski, Marek
    Hassa, Paul O.
    Hassler, Markus
    Ladurner, Andreas G.
    Pearl, Laurence H.
    Oliver, Antony W.
    [J]. NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2012, 19 (07) : 685 - +
  • [4] ATM, ATR, and DNA-PK: The Trinity at the Heart of the DNA Damage Response
    Blackford, Andrew N.
    Jackson, Stephen P.
    [J]. MOLECULAR CELL, 2017, 66 (06) : 801 - 817
  • [5] Alternative end-joining catalyzes class switch recombination in the absence of both Ku70 and DNA ligase 4
    Boboila, Cristian
    Yan, Catherine
    Wesemann, Duane R.
    Jankovic, Mila
    Wang, Jing H.
    Manis, John
    Nussenzweig, Andre
    Nussenzweig, Michel
    Alt, Frederick W.
    [J]. JOURNAL OF EXPERIMENTAL MEDICINE, 2010, 207 (02) : 417 - 427
  • [6] Single-strand break repair and genetic disease
    Caldecott, Keith W.
    [J]. NATURE REVIEWS GENETICS, 2008, 9 (08) : 619 - 631
  • [7] The multifaceted roles of PARP1 in DNA repair and chromatin remodelling
    Chaudhuri, Arnab Ray
    Nussenzweig, Andre
    [J]. NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2017, 18 (10) : 610 - 621
  • [8] The DNA Damage Response: Making It Safe to Play with Knives
    Ciccia, Alberto
    Elledge, Stephen J.
    [J]. MOLECULAR CELL, 2010, 40 (02) : 179 - 204
  • [9] Alternative pathways of non-homologous end joining (NHEJ) in genomic instability and cancer
    Dueva, Rositsa
    Iliakis, George
    [J]. TRANSLATIONAL CANCER RESEARCH, 2013, 2 (03) : 163 - 177
  • [10] Ku Regulates the Non-Homologous End Joining Pathway Choice of DNA Double-Strand Break Repair in Human Somatic Cells
    Fattah, Farjana
    Lee, Eu Han
    Weisensel, Natalie
    Wang, Yongbao
    Lichter, Natalie
    Hendrickson, Eric A.
    [J]. PLOS GENETICS, 2010, 6 (02):