Improving the Conservation of Mediterranean Chondrichthyans: The ELASMOMED DNA Barcode Reference Library

被引:55
|
作者
Cariani, Alessia [1 ]
Messinetti, Silvia [1 ,17 ]
Ferrari, Alice [1 ]
Arculeo, Marco [2 ]
Bonello, Juan J. [3 ]
Bonnici, Leanne [3 ]
Cannas, Rita [4 ]
Carbonara, Pierluigi [5 ]
Cau, Alessandro [4 ]
Charilaou, Charis [6 ]
El Ouamari, Najib [7 ]
Fiorentino, Fabio [8 ]
Follesa, Maria Cristina [4 ]
Garofalo, Germana [8 ]
Golani, Daniel [9 ]
Guarniero, Ilaria [10 ]
Hanner, Robert [11 ]
Hemida, Farid [12 ]
Kada, Omar [7 ]
Lo Brutto, Sabrina [2 ]
Mancusi, Cecilia [13 ]
Morey, Gabriel [14 ]
Schembri, Patrick J. [3 ]
Serena, Fabrizio [13 ]
Sion, Letizia [15 ]
Stagioni, Marco [1 ]
Tursi, Angelo [15 ]
Vrgoc, Nedo [16 ]
Steinke, Dirk [11 ]
Tinti, Fausto [1 ]
机构
[1] Univ Bologna, Dept Biol Geol & Environm Sci, Ravenna, Italy
[2] Univ Palermo, Dept STEBICEF, Palermo, Italy
[3] Univ Malta, Msida, Malta
[4] Univ Cagliari, Dept Life & Environm Sci, Cagliari, Italy
[5] COISPA Technol & Res, Bari, Italy
[6] Minist Agr Rural Dev & Environm, Dept Fisheries & Marine Res, Nicosia, Cyprus
[7] Inst Natl Rech Halieut, Ctr Reg, Nador, Morocco
[8] CNR, IAMC, Inst Coastal Marine Environm, Mazara Del Vallo, Italy
[9] Hebrew Univ Jerusalem, Dept Evolut Systemat & Ecol, Jerusalem, Israel
[10] Univ Bologna, Dept DIMEVET, Ozzano Dellemilia, Italy
[11] Univ Guelph, Ctr Biodivers Genom, Biodivers Inst Ontario, Guelph, ON, Canada
[12] Ecole Natl Super Sci Mer & Amenagement Littoral, Campus Univ Dely Ibrahim, Algiers, Algeria
[13] ARPAT, Reg Agcy Environm Protect Toscana, Livorno, Italy
[14] Asociac Ondine, Palma De Mallorca, Spain
[15] Univ Bari Aldo Moro, Dept Biol, Bari, Italy
[16] Inst Oceanog & Fisheries, Split, Croatia
[17] Univ Milan, Dept Biosci, Milan, Italy
来源
PLOS ONE | 2017年 / 12卷 / 01期
关键词
SKATES CHONDRICHTHYES; COMMUNITY STRUCTURE; ENVIRONMENTAL DNA; IDENTIFICATION; BIODIVERSITY; DIVERSITY; FISH; ATLANTIC; RAJIDAE; SHARKS;
D O I
10.1371/journal.pone.0170244
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Cartilaginous fish are particularly vulnerable to anthropogenic stressors and environmental change because of their K-selected reproductive strategy. Accurate data from scientific surveys and landings are essential to assess conservation status and to develop robust protection and management plans. Currently available data are often incomplete or incorrect as a result of inaccurate species identifications, due to a high level of morphological stasis, especially among closely related taxa. Moreover, several diagnostic characters clearly visible in adult specimens are less evident in juveniles. Here we present results generated by the ELASMOMED Consortium, a regional network aiming to sample and DNA-barcode the Mediterranean Chondrichthyans with the ultimate goal to provide a comprehensive DNA barcode reference library. This library will support and improve the molecular taxonomy of this group and the effectiveness of management and conservation measures. We successfully barcoded 882 individuals belonging to 42 species (17 sharks, 24 batoids and one chimaera), including four endemic and several threatened ones. Morphological misidentifications were found across most orders, further confirming the need for a comprehensive DNA barcoding library as a valuable tool for the reliable identification of specimens in support of taxonomist who are reviewing current identification keys. Despite low intraspecific variation among their barcode sequences and reduced samples size, five species showed preliminary evidence of phylogeographic structure. Overall, the ELASMOMED initiative further emphasizes the key role accurate DNA barcoding libraries play in establishing reliable diagnostic species specific features in otherwise taxonomically problematic groups for biodiversity management and conservation actions.
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页数:21
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