Genetic copy number variants in myocardial infarction patients with hyperlipidemia

被引:28
作者
Shia, Wei-Chung [1 ]
Ku, Tien-Hsiung [2 ]
Tsao, Yu-Ming [3 ]
Hsia, Chien-Hsun [4 ]
Chang, Yung-Ming [4 ]
Huang, Ching-Hui [4 ]
Chung, Yeh-Ching [5 ]
Hsu, Shih-Lan [6 ]
Liang, Kae-Woei [7 ]
Hsu, Fang-Rong [1 ,8 ]
机构
[1] Feng Chia Univ, Dept Informat Engn & Comp Sci, Taichung 40724, Taiwan
[2] Changhua Christian Hosp, Dept Anesthesia, Changhua, Changhua County, Taiwan
[3] Natl Chiao Tung Univ, Dept Comp Sci, Hsinchu, Taiwan
[4] Changhua Christian Hosp, Dept Cardiovasc Med, Changhua, Changhua County, Taiwan
[5] Natl Tsing Hua Univ, Dept Comp Sci, Hsinchu 30043, Taiwan
[6] Taichung Vet Gen Hosp, Dept Med Educ & Res, Taichung, Taiwan
[7] Taichung Vet Gen Hosp, Dept Cardiovasc Med, Taichung, Taiwan
[8] Feng Chia Univ, Masters Program Biomed Informat & Biomed Engn, Taichung 40724, Taiwan
来源
BMC GENOMICS | 2011年 / 12卷
关键词
CORONARY-ARTERY-DISEASE; FAMILIAL COMBINED HYPERLIPIDEMIA; ASSOCIATION ANALYSIS; STRUCTURAL VARIANTS; CHROMOSOME; 9P21; HUMAN GENOME; SNPS; ATHEROSCLEROSIS; DYSLIPIDEMIA; STATES;
D O I
10.1186/1471-2164-12-S3-S23
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background: Cardiovascular disease is the chief cause of death in Taiwan and many countries, of which myocardial infarction (MI) is the most serious condition. Hyperlipidemia appears to be a significant cause of myocardial infarction, because it causes atherosclerosis directly. In recent years, copy number variation (CNV) has been analyzed in genomewide association studies of complex diseases. In this study, CNV was analyzed in blood samples and SNP arrays from 31 myocardial infarction patients with hyperlipidemia. Results: We identified seven CNV regions that were associated significantly with hyperlipidemia and myocardial infarction in our patients through multistage analysis (P<0.001), at 1p21.3, 1q31.2 (CDC73), 1q42.2 (DISC1), 3p21.31 (CDCP1), 10q11.21 (RET) 12p12.3 (PIK3C2G) and 16q23.3 (CDH13), respectively. In particular, the CNV region at 10q11.21 was examined by quantitative real-time PCR, the results of which were consistent with microarray findings. Conclusions: Our preliminary results constitute an alternative method of evaluating the relationship between CNV regions and cardiovascular disease. These susceptibility CNV regions may be used as biomarkers for early-stage diagnosis of hyperlipidemia and myocardial infarction, rendering them valuable for further research and discussion.
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页数:8
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