An association mapping analysis of dormancy and pre-harvest sprouting in wheat

被引:37
作者
Arif, M. A. Rehman [1 ]
Neumann, K. [1 ]
Nagel, M. [1 ]
Kobiljski, B. [2 ]
Lohwasser, U. [1 ]
Boerner, A. [1 ]
机构
[1] Leibniz Inst Plant Genet & Crop Plant Res IPK, D-06466 Gatersleben, Germany
[2] Inst Field & Vegetable Crops, Novi Sad 21000, Serbia
关键词
Chromosome bin; Germination; DArT; Marker-trait associations; Triticum aestivum; CONTROLLING SEED DORMANCY; MAJOR QTL; CHROMOSOME; 3A; ABSCISIC-ACID; LINKAGE MAP; RESISTANCE; RICE; TRAITS; DART; SSR;
D O I
10.1007/s10681-012-0705-1
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
Seed dormancy and pre-harvest sprouting are important traits in bread wheat. Bi-parental populations have permitted the identification of several genes/quantitative trait loci controlling these traits, mapping to various bread wheat chromosomes. Here, we report the use of association mapping to uncover the genetic basis of both traits in a panel of 96 diverse winter wheat cultivars to establish the presence of marker-trait associations on many chromosomes. Potential candidate genes were identified by studying the gene content of the chromosome bins into which the major marker trait associations mapped.
引用
收藏
页码:409 / 417
页数:9
相关论文
共 49 条
[1]   Association mapping of yield and its components in rice cultivars [J].
Agrama, H. A. ;
Eizenga, G. C. ;
Yan, W. .
MOLECULAR BREEDING, 2007, 19 (04) :341-356
[2]   RFLP ANALYSIS OF GENOMIC REGIONS ASSOCIATED WITH RESISTANCE TO PREHARVEST SPROUTING IN WHEAT [J].
ANDERSON, JA ;
SORRELLS, ME ;
TANKSLEY, SD .
CROP SCIENCE, 1993, 33 (03) :453-459
[3]   Genome-wide association mapping in Arabidopsis identifies previously known flowering time and pathogen resistance genes [J].
Aranzana, MJ ;
Kim, S ;
Zhao, KY ;
Bakker, E ;
Horton, M ;
Jakob, K ;
Lister, C ;
Molitor, J ;
Shindo, C ;
Tang, CL ;
Toomajian, C ;
Traw, B ;
Zheng, HG ;
Bergelson, J ;
Dean, C ;
Marjoram, P ;
Nordborg, M .
PLOS GENETICS, 2005, 1 (05) :531-539
[4]   Genetic studies of seed longevity in hexaploid wheat using segregation and association mapping approaches [J].
Arif, M. A. Rehman ;
Nagel, M. ;
Neumann, K. ;
Kobiljski, B. ;
Lohwasser, U. ;
Boerner, A. .
EUPHYTICA, 2012, 186 (01) :1-13
[5]   Abscisic acid, gibberellin and cell viability in cereal aleurone [J].
Bethke, PC ;
Fath, A ;
Spiegel, YN ;
Hwang, YS ;
Jones, RL .
EUPHYTICA, 2002, 126 (01) :3-11
[6]   TASSEL: software for association mapping of complex traits in diverse samples [J].
Bradbury, Peter J. ;
Zhang, Zhiwu ;
Kroon, Dallas E. ;
Casstevens, Terry M. ;
Ramdoss, Yogesh ;
Buckler, Edward S. .
BIOINFORMATICS, 2007, 23 (19) :2633-2635
[7]   Rich allelic variations of Viviparous-1A and their associations with seed dormancy/pre-harvest sprouting of common wheat [J].
Chang, Cheng ;
Zhang, Hai-Ping ;
Zhao, Qiu-Xia ;
Feng, Ji-Ming ;
Si, Hong-Qi ;
Lu, Jie ;
Ma, Chuan-Xi .
EUPHYTICA, 2011, 179 (02) :343-353
[8]   A major QTL controlling seed dormancy and pre-harvest sprouting resistance on chromosome 4A in a Chinese wheat landrace [J].
Chen, Cui-Xia ;
Cai, Shi-Bin ;
Bai, Gui-Hua .
MOLECULAR BREEDING, 2008, 21 (03) :351-358
[9]   Association analysis of historical bread wheat germplasm using additive genetic covariance of relatives and population structure [J].
Crossa, Jose ;
Burgueno, Juan ;
Dreisigacker, Susanne ;
Vargas, Mateo ;
Herrera-Foessel, Sybil A. ;
Lillemo, Morten ;
Singh, Ravi P. ;
Trethowan, Richard ;
Warburton, Marilyn ;
Franco, Jorge ;
Reynolds, Matthew ;
Crouch, Jonathan H. ;
Ortiz, Rodomiro .
GENETICS, 2007, 177 (03) :1889-1913
[10]   Influence of the testa on seed dormancy, germination, and longevity in Arabidopsis [J].
Debeaujon, I ;
Léon-Kloosterziel, KM ;
Koornneef, M .
PLANT PHYSIOLOGY, 2000, 122 (02) :403-413