An automated, pressure-driven sampling device for harvesting from liquid cultures for genomic and biochemical analyses

被引:3
作者
Aragon, Anthony D.
Quinones, Gabriel A.
Allen, Chris
Thomas, Jason
Roy, Sushmita
Davidson, George S.
Wentzell, Peter D.
Millier, Brian
Jaetao, Jason E.
Rodriguez, Angelina L.
Werrier-Washburne, Margaret [1 ]
机构
[1] Univ New Mexico, Dept Biol, Albuquerque, NM 87131 USA
[2] Univ New Mexico, Dept Comp Sci, Albuquerque, NM 87131 USA
[3] Sandia Natl Labs, Albuquerque, NM 87185 USA
[4] Dalhousie Univ, Dept Chem, Halifax, NS B3H 4J3, Canada
关键词
transcriptional profiling; time course analysis; microarray; yeast; rapid sampling;
D O I
10.1016/j.mimet.2005.08.015
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Here we describe an automated, pressure-driven, sampling device for harvesting 10 to 30 ml samples, in replicate, with intervals as short as 10 s. Correlation between biological replicate time courses measured by microarrays was extremely high. The sampler enables sampling at intervals within the range of many important biological processes. (c) 2005 Elsevier B.V. All rights reserved.
引用
收藏
页码:357 / 360
页数:4
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共 5 条
  • [1] Sampling Saccharomyces cerevisiae cells by rapid filtration improves the yield of mRNAs
    Belinchón, NM
    Flores, CL
    Gancedo, JM
    [J]. FEMS YEAST RESEARCH, 2004, 4 (07) : 751 - 756
  • [2] Improved rapid sampling for in vivo kinetics of intracellular metabolites in Saccharomyces cerevisiae
    Lange, HC
    Eman, M
    van Zuijlen, G
    Visser, D
    van Dam, JC
    Frank, J
    de Mattos, MJT
    Heijnen, JJ
    [J]. BIOTECHNOLOGY AND BIOENGINEERING, 2001, 75 (04) : 406 - 415
  • [3] Genomic analysis of stationary-phase and exit in Saccharomyces cerevisiae:: Gene expression and identification of novel essential genes
    Martinez, MJ
    Roy, S
    Archuletta, AB
    Wentzell, PD
    Santa Anna-Arriola, S
    Rodriguez, AL
    Aragon, AD
    Quiñones, GA
    Allen, C
    Werner-Washburne, M
    [J]. MOLECULAR BIOLOGY OF THE CELL, 2004, 15 (12) : 5295 - 5305
  • [4] Critical evaluation of sampling techniques for residual glucose determination in carbon-limited chemostat culture of Saccharomyces cerevisiae
    Mashego, MR
    van Gulik, WM
    Vinke, JL
    Heijnen, JJ
    [J]. BIOTECHNOLOGY AND BIOENGINEERING, 2003, 83 (04) : 395 - 399
  • [5] IN-VIVO ANALYSIS OF GLUCOSE-INDUCED FAST CHANGES IN YEAST ADENINE-NUCLEOTIDE POOL APPLYING A RAPID SAMPLING TECHNIQUE
    THEOBALD, U
    MAILINGER, W
    REUSS, M
    RIZZI, M
    [J]. ANALYTICAL BIOCHEMISTRY, 1993, 214 (01) : 31 - 37