Multi-layer Born multiple-scattering model for 3D phase microscopy

被引:103
作者
Chen, Michael [1 ]
Ren, David [1 ]
Liu, Hsiou-Yuan [1 ]
Chowdhury, Shwetadwip [1 ]
Waller, Laura [1 ]
机构
[1] Univ Calif Berkeley, Dept Elect Engn & Comp Sci, Berkeley, CA 94720 USA
来源
OPTICA | 2020年 / 7卷 / 05期
基金
美国国家科学基金会;
关键词
DIGITAL MICROMIRROR DEVICE; DIFFRACTION TOMOGRAPHY; HIGH-RESOLUTION; IMAGE-FORMATION; RECONSTRUCTION; ALGORITHMS; INTENSITY; FIELD; ANGLE;
D O I
10.1364/OPTICA.383030
中图分类号
O43 [光学];
学科分类号
070207 ; 0803 ;
摘要
We propose an accurate and computationally efficient 3D scattering model, multi-layer Born (MLB), and use it to recover the 3D refractive index (RI) of thick biological samples. For inverse problems recovering the complex field of thick samples, weak scattering models (e.g., first Born) may fail or underestimate the RI, especially with a large index contrast. Multi-slice (MS) beam propagation methods model multiple scattering to provide more realistic reconstructions; however, MS does not properly account for highly oblique scattering, nor does it model backward scattering. Our proposed MLB model uses a first Born model at each of many slices, accurately capturing the oblique scattering effects and estimating the backward scattering process. When used in conjunction with an inverse solver, the model provides more accurate RI reconstructions for high-resolution phase tomography. Importantly, MLB retains a reasonable computation time that is critical for practical implementation with iterative inverse algorithms. (C) 2020 Optical Society of America under the terms of the OSA Open Access Publishing Agreement
引用
收藏
页码:394 / 403
页数:10
相关论文
共 46 条
  • [1] Fast Gradient-Based Algorithms for Constrained Total Variation Image Denoising and Deblurring Problems
    Beck, Amir
    Teboulle, Marc
    [J]. IEEE TRANSACTIONS ON IMAGE PROCESSING, 2009, 18 (11) : 2419 - 2434
  • [2] Modeling quantitative phase image formation under tilted illuminations
    Bon, Pierre
    Wattellier, Benoit
    Monneret, Serge
    [J]. OPTICS LETTERS, 2012, 37 (10) : 1718 - 1720
  • [3] Born M, 2000, Principles of optics: electromagnetic theory of propagation, interference and diffraction of light
  • [4] High-resolution ab initio three-dimensional x-ray diffraction microscopy
    Chapman, HN
    Barty, A
    Marchesini, S
    Noy, A
    Hau-Riege, SR
    Cui, C
    Howells, MR
    Rosen, R
    He, H
    Spence, JCH
    Weierstall, U
    Beetz, T
    Jacobsen, C
    Shapiro, D
    [J]. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION, 2006, 23 (05) : 1179 - 1200
  • [5] Three-dimensional reconstruction from real data using a conjugate gradient-coupled dipole method
    Chaumet, Patrick C.
    Belkebir, Kamal
    [J]. INVERSE PROBLEMS, 2009, 25 (02)
  • [6] 3D differential phase contrast microscopy
    Chen, Michael
    Tian, Lei
    Waller, Laura
    [J]. BIOMEDICAL OPTICS EXPRESS, 2016, 7 (10): : 3940 - 3950
  • [7] Chowdhury S, 2019, OPTICA, V6, P1211, DOI [10.1364/OPTICA.6.001211, 10.1364/optica.6.001211]
  • [8] Refractive index tomography with structured illumination
    Chowdhury, Shwetadwip
    Eldridge, Will J.
    Wax, Adam
    Izatt, Joseph
    [J]. OPTICA, 2017, 4 (05): : 537 - 545
  • [9] Cotte Y, 2013, NAT PHOTONICS, V7, P113, DOI [10.1038/nphoton.2012.329, 10.1038/NPHOTON.2012.329]
  • [10] Ptychographic X-ray computed tomography at the nanoscale
    Dierolf, Martin
    Menzel, Andreas
    Thibault, Pierre
    Schneider, Philipp
    Kewish, Cameron M.
    Wepf, Roger
    Bunk, Oliver
    Pfeiffer, Franz
    [J]. NATURE, 2010, 467 (7314) : 436 - U82