Statistics and topology of fluctuating ribbons

被引:4
作者
Yong, Ee Hou [1 ]
Dary, Farisan [1 ]
Giomi, Luca [2 ]
Mahadevan, L. [3 ,4 ,5 ]
机构
[1] Nanyang Technol Univ, Sch Phys & Math Sci, Div Phys & Appl Phys, Singapore 637371, Singapore
[2] Leiden Univ, Inst Lorentz, NL-2300 RA Leiden, Netherlands
[3] Harvard Univ, Sch Engn & Appl Sci, Cambridge, MA 02138 USA
[4] Harvard Univ, Dept Phys, Cambridge, MA 02138 USA
[5] Harvard Univ, Dept Organism & Evolutionary Biol, Cambridge, MA 02138 USA
关键词
statistical mechanics; polymer physics; topological mechanics; ENTROPIC ELASTICITY; DNA; MECHANICS; TWIST; POLYMERS; LINKING; NUMBER;
D O I
10.1073/pnas.2122907119
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Ribbons are a class of slender structures whose length, width, and thickness are widely separated from each other. This scale separation gives a ribbon unusual mechanical properties in athermal macroscopic settings, for example, it can bend without twisting, but cannot twist without bending. Given the ubiquity of ribbon-like biopolymers in biology and chemistry, here we study the statistical mechanics of microscopic inextensible, fluctuating ribbons loaded by forces and torques. We show that these ribbons exhibit a range of topologically and geometrically complex morphologies exemplified by three phases-a twist-dominated helical phase (HT), a writhe-dominated helical phase (HW), and an entangled phase-that arise as the applied torque and force are varied. Furthermore, the transition from HW to HT phases is characterized by the spontaneous breaking of parity symmetry and the disappearance of perversions (that correspond to chirality-reversing localized defects). This leads to a universal response curve of a topological quantity, the link, as a function of the applied torque that is similar to magnetization curves in second-order phase transitions.
引用
收藏
页数:9
相关论文
共 50 条
[1]   A one-dimensional model for elastic ribbons: A little stretching makes a big difference [J].
Audoly, Basile ;
Neukirch, Sebastien .
JOURNAL OF THE MECHANICS AND PHYSICS OF SOLIDS, 2021, 153
[2]   Microtubule dynamics: an interplay of biochemistry and mechanics [J].
Brouhard, Gary J. ;
Rice, Luke M. .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2018, 19 (07) :451-463
[3]   Ten years of tension: single-molecule DNA mechanics [J].
Bustamante, C ;
Bryant, Z ;
Smith, SB .
NATURE, 2003, 421 (6921) :423-427
[4]   ENTROPIC ELASTICITY OF LAMBDA-PHAGE DNA [J].
BUSTAMANTE, C ;
MARKO, JF ;
SIGGIA, ED ;
SMITH, S .
SCIENCE, 1994, 265 (5178) :1599-1600
[5]   Nonlinear elasticity of an α-helical polypeptide -: art. no. 031905 [J].
Chakrabarti, B ;
Levine, AJ .
PHYSICAL REVIEW E, 2005, 71 (03)
[6]   Topology, Geometry, and Mechanics of Strongly Stretched and Twisted Filaments: Solenoids, Plectonemes, and Artificial Muscle Fibers [J].
Charles, Nicholas ;
Gazzola, Mattia ;
Mahadevan, L. .
PHYSICAL REVIEW LETTERS, 2019, 123 (20)
[7]  
Darwin F., 2013, POWER MOVEMENT PLANT, V1
[8]  
De Gennes P. G., 1979, SCALING CONCEPTS POL
[9]   Actin-microtubule crosstalk in cell biology [J].
Dogterom, Marileen ;
Koenderink, Gijsje H. .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2019, 20 (01) :38-54
[10]   FLUCTUATIONS AND STIFFNESS OF DOUBLE-STRANDED POLYMERS - RAILWAY TRACK MODEL [J].
EVERAERS, R ;
BUNDSCHUH, R ;
KREMER, K .
EUROPHYSICS LETTERS, 1995, 29 (03) :263-268