Standardization of Nucleic Acid Tests for Clinical Measurements of Bacteria and Viruses

被引:38
作者
Pavsic, Jernej [1 ,2 ]
Devonshire, Alison S. [3 ]
Parkes, Helen [3 ]
Schimmel, Heinz [4 ]
Foy, Carole A. [3 ]
Karczmarczyk, Maria [4 ]
Gutierrez-Aguirre, Ion [1 ]
Honeyborne, Isobella [5 ]
Huggett, Jim F. [3 ]
McHugh, Timothy D. [5 ]
Milavec, Mojca [1 ]
Zeichhardt, Heinz [6 ]
Zel, Jana [1 ]
机构
[1] Natl Inst Biol, Dept Biotechnol & Syst Biol, Ljubljana, Slovenia
[2] Jozef Stefan Int Postgrad Sch, Ljubljana, Slovenia
[3] LGC, Teddington, Middx, England
[4] European Commiss Directorate, Gen Joint Res Ctr JRC, Inst Reference Mat & Measurements, Geel, Belgium
[5] UCL, Dept Infect, Ctr Clin Microbiol, London, England
[6] Charite, Inst Virol, D-13353 Berlin, Germany
关键词
REAL-TIME PCR; DROPLET DIGITAL PCR; INFLUENZA-A VIRUS; TUBERCULOSIS COMPLEX; CYTOMEGALOVIRUS CMV; XPERT MTB/RIF; LOAD; QUANTIFICATION; ASSAYS; TRACEABILITY;
D O I
10.1128/JCM.02136-14
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Nucleic acid-based tests for infectious diseases currently used in the clinical laboratory and in point-of-care devices are diverse. Measurement challenges associated with standardization of quantitative viral load testing are discussed in relation to human cytomegalovirus, BK virus, and Epstein-Barr virus, while the importance of defining the performance of qualitative methods is illustrated with Mycobacterium tuberculosis and influenza virus. The development of certified reference materials whose values are traceable to higher-order standards and reference measurement procedures, using, for instance, digital PCR, will further contribute to the understanding of analytical performance characteristics and promote clinical data comparability.
引用
收藏
页码:2008 / 2014
页数:7
相关论文
共 46 条
  • [1] Comparison of Xpert MTB/RIF with ProbeTec ET DTB and COBAS TaqMan MTB for direct detection of M. tuberculosis complex in respiratory specimens
    Antonenka, Uladzimir
    Hofmann-Thiel, Sabine
    Turaev, Laziz
    Esenalieva, Ainura
    Abdulloeva, Mokhonim
    Sahalchyk, Evgeni
    Alnour, Tarig
    Hoffmann, Harald
    [J]. BMC INFECTIOUS DISEASES, 2013, 13
  • [2] Armbruster David, 2007, Clin Biochem Rev, V28, P105
  • [3] Clinical value of IS6110-based loop-mediated isothermal amplification for detection of Mycobacterium tuberculosis complex in respiratory specimens
    Aryan, Ehsan
    Makvandi, Manoochehr
    Farajzadeh, Ahmad
    Huygen, Kris
    Alvandi, Amir-Hooshang
    Gouya, Mohammad-Mehdi
    Sadrizadeh, Ali
    Romano, Marta
    [J]. JOURNAL OF INFECTION, 2013, 66 (06) : 487 - 493
  • [4] Monitoring of BK Viral Load in Renal Allograft Recipients by Real-Time PCR Assays
    Bechert, Charles J.
    Schnadig, Vicki J.
    Payne, Deborah A.
    Dong, Jianli
    [J]. AMERICAN JOURNAL OF CLINICAL PATHOLOGY, 2010, 133 (02) : 242 - 250
  • [5] Comparison of Methods for Accurate Quantification of DNA Mass Concentration with Traceability to the International System of Units
    Bhat, Somanath
    Curach, Natalie
    Mostyn, Thomas
    Bains, Gursharan Singh
    Griffiths, Kate R.
    Emslie, Kerry R.
    [J]. ANALYTICAL CHEMISTRY, 2010, 82 (17) : 7185 - 7192
  • [6] Influenza A H1N1 diagnostics: the first, the fastest, and the most reliable
    Biere, Barbara
    Schweiger, Brunhilde
    Nitsche, Andreas
    [J]. LANCET INFECTIOUS DISEASES, 2009, 9 (12) : 721 - 722
  • [7] Comparative Evaluation of Three Automated Systems for DNA Extraction in Conjunction with Three Commercially Available Real-Time PCR Assays for Quantitation of Plasma Cytomegalovirus DNAemia in Allogeneic Stem Cell Transplant Recipients
    Bravo, Dayana
    Angeles Clari, Maria
    Costa, Elisa
    Munoz-Cobo, Beatriz
    Solano, Carlos
    Jose Remigia, Maria
    Navarro, David
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2011, 49 (08) : 2899 - 2904
  • [8] A Commutable Cytomegalovirus Calibrator Is Required to Improve the Agreement of Viral Load Values between Laboratories
    Caliendo, Angela M.
    Shahbazian, Mona D.
    Schaper, Carl
    Ingersoll, Jessica
    Abdul-Ali, Deborah
    Boonyaratanakornkit, Jerry
    Pang, Xiao-Li
    Fox, Julie
    Preiksaitis, Jutta
    Schoenbrunner, E. Ralf
    [J]. CLINICAL CHEMISTRY, 2009, 55 (09) : 1701 - 1710
  • [9] Performance Characteristics of the Cepheid Xpert MTB/RIF Test in a Tuberculosis Prevalence Survey
    Dorman, Susan E.
    Chihota, Violet N.
    Lewis, James J.
    Shah, Maunank
    Clark, David
    Grant, Alison D.
    Churchyard, Gavin J.
    Fielding, Katherine L.
    [J]. PLOS ONE, 2012, 7 (08):
  • [10] Comparison of Commercial Extraction Systems and PCR Assays for Quantification of Epstein-Barr Virus DNA Load in Whole Blood
    Germi, Raphaele
    Lupo, Julien
    Semenova, Touyana
    Larrat, Sylvie
    Magnat, Nelly
    Grossi, Laurence
    Seigneurin, Jean-Marie
    Morand, Patrice
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2012, 50 (04) : 1384 - 1389