Combined use of phosphonium-erythrosin B-based nanoGUMBOS, UV-Vis spectroscopy, and chemometrics for discrimination and quantification of proteins

被引:4
作者
Azevedo, Ana M. O. [1 ]
Sousa, Clara [2 ]
Rodrigues, S. Sofia M. [1 ]
Chen, Mi [3 ]
Ayala, Caitlan E. [3 ]
Perez, Rocio L. [3 ,4 ]
Santos, Joao L. M. [1 ]
Warner, Isiah M. [3 ]
Saraiva, M. Lucia M. F. S. [1 ]
机构
[1] Univ Porto, Fac Farm, Lab Quim Aplicada, LAQV,REQUIMTE,Dept Ciencias Quim, Rua Jorge Viterbo Ferreira 228, P-4050313 Porto, Portugal
[2] Univ Catolica Portuguesa, CBQF Ctr Biotecnol & Quim Fina, Lab Associado, Escola Super Biotecnol, Rua Diogo Botelho 1327, P-4169005 Porto, Portugal
[3] Louisiana State Univ, Dept Chem, Baton Rouge, LA 70803 USA
[4] Georgia Southern Univ, Dept Chem & Biochem, Statesboro, GA 30458 USA
关键词
Chemometrics; NanoGUMBOS; Proteins; Ultraviolet-visible spectroscopy; PATTERN-RECOGNITION; ARRAY; NANOPARTICLES;
D O I
10.1016/j.dyepig.2022.110635
中图分类号
O69 [应用化学];
学科分类号
081704 ;
摘要
Nanoparticles derived from a group of uniform materials based on organic salts (nanoGUMBOS) are considered promising candidates for protein analysis due to their facile synthesis in aqueous media and high tunability. In this study, a phosphonium-erythrosin B-based nanoGUMBOS (i.e., [P4444]2[EB]) was prepared using an ultrasound-assisted reprecipitation method, and its ability to discriminate and quantify proteins was evaluated. Sonication time (30 s, 5 min, and 15 min) and cyclodextrin templating (alpha-, 2-HP-beta-, and gamma-CD) were investigated for their effects on discrimination performance of synthesized nanomaterial. Six proteins (albumin, hemoglobin, trypsin, catalase, lysozyme, and cytochrome c) with different abundance levels and physicochemical properties were selected as target analytes. Absorbance response patterns generated from interactions between [P4444]2[EB] nanoGUMBOS and proteins were analyzed using partial least squares discriminant analysis. Percentages of correct protein discrimination ranged from 94.6 to 99.6%, with the latter being the best result obtained using non-templated nanoGUMBOS formed after 5 min sonication. Under optimized conditions, it was possible to discriminate all protein samples with percentages of correct assignments greater than 90% for concentrations as low as 2.0 mu g mL-1. The discrimination capability of synthesized nanoGUMBOS was further evaluated using mixtures of different ratios of lysozyme, cytochrome c, and hemoglobin. Finally, partial least squares models were developed for protein quantification and the best performance was observed for albumin. Results support potential use of [P4444]2[EB] nanoGUMBOS in combination with ultraviolet-visible spectroscopy and chemo-metrics for qualitative and quantitative analyses of individual proteins and mixtures of proteins.
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页数:8
相关论文
共 49 条
[1]   Variable selection in discriminant partial least-squares analysis [J].
Alsberg, BK ;
Kell, DB ;
Goodacre, R .
ANALYTICAL CHEMISTRY, 1998, 70 (19) :4126-4133
[2]   The human plasma proteome - History, character, and diagnostic prospects [J].
Anderson, NL ;
Anderson, NG .
MOLECULAR & CELLULAR PROTEOMICS, 2002, 1 (11) :845-867
[3]  
[Anonymous], 1999, Near infrared methods - Guidelines for model development and maintenance. Method 39-00.01
[4]   Protein discrimination using erythrosin B-based GUMBOS in combination with UV-Vis spectroscopy and chemometrics [J].
Azevedo, Ana M. O. ;
Sousa, Clara ;
Chen, Mi ;
Ayala, Caitlan E. ;
Perez, Rocio L. ;
Santos, Joao L. M. ;
Warner, Isiah M. ;
Saraiva, M. Lucia M. F. S. .
TALANTA, 2022, 240
[5]   GUMBOS and nanoGUMBOS in chemical and biological analysis: A review [J].
Azevedo, Ana M. O. ;
Santos, Joao L. M. ;
Warner, Isiah M. ;
Saraiva, M. Lucia M. F. S. .
ANALYTICA CHIMICA ACTA, 2020, 1133 (1133) :180-198
[6]   DLS and zeta potential - What they are and what they are not? [J].
Bhattacharjee, Sourav .
JOURNAL OF CONTROLLED RELEASE, 2016, 235 :337-351
[7]   Comparison of Chemotherapeutic Activities of Rhodamine-Based GUMBOS and NanoGUMBOS [J].
Bhattarai, Nimisha ;
Chen, Mi ;
Perez, Rocio L. ;
Ravula, Sudhir ;
Strongin, Robert M. ;
McDonough, Karen ;
Warner, Isiah M. .
MOLECULES, 2020, 25 (14)
[8]   Nanoparticle-based optical sensor arrays [J].
Bigdeli, Arafeh ;
Ghasemi, Forough ;
Golmohammadi, Hamed ;
Abbasi-Moayed, Samira ;
Nejad, M. Amin Farahmand ;
Fahimi-Kashani, Nafiseh ;
Jafarinejad, Somayeh ;
Shahrajabian, Maryam ;
Hormozi-Nezhad, M. Reza .
NANOSCALE, 2017, 9 (43) :16546-16563
[9]   Green synthesis of bimetallic ZnO-CuO nanoparticles and their cytotoxicity properties [J].
Cao, Yan ;
Dhahad, Hayder A. ;
El-Shorbagy, M. A. ;
Alijani, Hajar Q. ;
Zakeri, Mana ;
Heydari, Abolfazl ;
Bahonar, Ehsan ;
Slouf, Miroslav ;
Khatami, Mehrdad ;
Naderifar, Mahin ;
Iravani, Siavash ;
Khatami, Sanaz ;
Dehkordi, Farnaz Farzaneh .
SCIENTIFIC REPORTS, 2021, 11 (01)
[10]   Mitochondria targeting IR780-based nanoGUMBOS for enhanced selective toxicity towards cancer cells [J].
Chen, Mi ;
Bhattarai, Nimisha ;
Cong, Mingyan ;
Perez, Rocio L. ;
McDonough, Karen C. ;
Warner, Isiah M. .
RSC ADVANCES, 2018, 8 (55) :31700-31709