Complete mitochondrial genome of Callipogon relictus Semenov (Coleoptera: Cerambycidae): a natural monument and endangered species in Korea

被引：7

作者：

Lim, Jongok ^{[1
]}

Yi, Dong-Keun ^{[2
]}

Kim, Young Ho ^{[3
]}

Lee, Wonhoon ^{[4
,5
]}

Kim, Sora ^{[6
,7
]}

Kang, Jung-Hoon ^{[8
]}

Kim, Il-Kwon ^{[1
]}

机构：

[1] Korea Natl Arboretum, Div Forest Biodivers, Pochon 11186, Gyeonggi Provin, South Korea

[2] Korea Res Inst Biosci & Biotechnol, Daejeon, South Korea

[3] Kyungpook Natl Univ, Dept Appl Biol, Sangju, South Korea

[4] Gyeongsang Natl Univ, Dept Plant Med, Jinju, South Korea

[5] Gyeongsang Natl Univ, Inst Agr & Life Sci, Jinju, South Korea

[6] Seoul Natl Univ, Lab Insect Biosystemat, Dept Agr Biotechnol, Seoul, South Korea

[7] Seoul Natl Univ, Res Inst Agr & Life Sci, Seoul, South Korea

[8] Natl Res Inst Cultural Heritage, Nat Heritage Ctr, Daejeon, South Korea

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2017年 / 2卷 / 02期

关键词：

Korean natural monument; endangered species; mitogenome; longhorn beetle; Callipogon relictus; SEQUENCE;

D O I：

10.1080/23802359.2017.1372718

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

In the present study, we report the first complete mitochondrial DNA genome of the genus Callipogon based on C. relictus, a natural monument and endangered species in South Korea. The mitogenome is 15,742 base pairs with 13 protein coding genes (PCGs), two rRNAs, 22 tRNAs, and a 1033 bp long AT-rich region. The overall base composition was 67.3% AT and 32.7 GC. Among 13 PCGs, seven genes (Nad2, Atp8, Atp6, Nad4L, Nad6, Cob, Nad1) harbour the typical stop codon TAA or TAG, whereas remaining five genes terminate with T. Interestingly, Cox3 employs AGA as the termination codon.

引用

页码：629 / 631

页数：3

共 9 条

[1]

Cherepanov A. I., 1988, CERAMBYCIDAE NO ASIA, V1

[2] Complete mitochondrial genome of Aeolesthes oenochrous (Fairmaire) (Coleoptera: Cerambycidae): an endangered and colorful longhorn beetle [J].

Chiu, William Chien-Hsien ;

Yeh, Wen-Bin ;

Chen, Mei-Er ;

Yang, Man-Miao .

MITOCHONDRIAL DNA PART A, 2016, 27 (01) :686-687

[3] Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data [J].

Kearse, Matthew ;

Moir, Richard ;

Wilson, Amy ;

Stones-Havas, Steven ;

Cheung, Matthew ;

Sturrock, Shane ;

Buxton, Simon ;

Cooper, Alex ;

Markowitz, Sidney ;

Duran, Chris ;

Thierer, Tobias ;

Ashton, Bruce ;

Meintjes, Peter ;

Drummond, Alexei .

BIOINFORMATICS, 2012, 28 (12) :1647-1649

[4] Complete mitochondrial genome sequence of the yellow-spotted long-horned beetle Psacothea hilaris (Coleoptera: Cerambycidae) and phylogenetic analysis among coleopteran insects [J].

Kim, Ki-Gyoung ;

Hong, Mee Yeon ;

Kim, Min Jee ;

Im, Hyun Hwak ;

Kim, Man Il ;

Bae, Chang Hwan ;

Seo, Sook Jae ;

Lee, Sang Hyun ;

Kim, Iksoo .

MOLECULES AND CELLS, 2009, 27 (04) :429-441

[5]

Lim Jongok, 2014, Korean Journal of Applied Entomology, V53, P111, DOI 10.5656/KSAE.2013.11.1.061

[6] Molecular identification and larval description of Callipogon relictus Semenov (Coleoptera: Cerambycidae), a natural monument of South Korea [J].

Lim, Jongok ;

Kim, Minyoung ;

Kim, Il-Kwon ;

Jung, Sunghoon ;

Lim, Jong-Su ;

Park, Shin-Young ;

Kim, Kyung-Mi ;

Kim, Cheolhak ;

Byun, Bong-Kyu ;

Lee, Bong-Woo ;

Lee, Seunghwan .

JOURNAL OF ASIA-PACIFIC ENTOMOLOGY, 2013, 16 (03) :223-227

[7] The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs [J].

Schattner, P ;

Brooks, AN ;

Lowe, TM .

NUCLEIC ACIDS RESEARCH, 2005, 33 :W686-W689

[8] Family-Level Sampling of Mitochondrial Genomes in Coleoptera: Compositional Heterogeneity and Phylogenetics [J].

Timmermans, Martijn J. T. N. ;

Barton, Christopher ;

Haran, Julien ;

Ahrens, Dirk ;

Culverwell, C. Lorna ;

Ollikainen, Alison ;

Dodsworth, Steven ;

Foster, Peter G. ;

Bocak, Ladislav ;

Vogler, Alfried P. .

GENOME BIOLOGY AND EVOLUTION, 2016, 8 (01) :161-175

[9] Phylogenetically informative rearrangements in mitochondrial genomes of Coleoptera, and monophyly of aquatic elateriform beetles (Dryopoidea) [J].

Timmermans, Martijn J. T. N. ;

Vogler, Alfried P. .

MOLECULAR PHYLOGENETICS AND EVOLUTION, 2012, 63 (02) :299-304

← 1 →