Identification of Risk Genes Associated with Myocardial Infarction-Big Data Analysis and Literature Review

被引:18
作者
Tirdea, Cosmin [1 ]
Hostiuc, Sorin [1 ]
Moldovan, Horatiu [2 ,3 ]
Scafa-Udriste, Alexandru [3 ,4 ]
机构
[1] Carol Davila Univ Med, Fac Stomatol, Dept Legal Med & Bioeth, Bucharest 050474, Romania
[2] Carol Davila Univ Med, Fac Med, Dept Cardiac Surg, Bucharest 050474, Romania
[3] Clin Emergency Hosp Bucharest, Bucharest 014461, Romania
[4] Carol Davila Univ Med, Fac Med, Dept Cardiol, Bucharest 050474, Romania
关键词
gene; myocardial infarction; risk; association; COAGULATION-FACTOR-VII; CONFERRING RISK; POLYMORPHISM; VARIANTS; COMMON;
D O I
10.3390/ijms232315008
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Acute myocardial infarction occurs when blood supply to a particular coronary artery is cut off, causing ischemia or hypoxia and subsequent heart muscle destruction in the vascularized area. With a mortality rate of 17% per year, myocardial infarction (MI) is still one of the top causes of death globally. Numerous studies have been done to identify the genetic risk factors for myocardial infarction, as a positive family history of heart disease is one of the most potent cardiovascular risk factors. The goal of this review is to compile all the information currently accessible in the literature on the genes associated with AMI. We performed a big data analysis of genes associated with acute myocardial infarction, using the following keywords: "myocardial infarction", "genes", "involvement", "association", and "risk". The analysis was done using PubMed, Scopus, and Web of Science. Data from the title, abstract, and keywords were exported as text files and imported into an Excel spreadsheet. Its analysis was carried out using the VOSviewer v. 1.6.18 software. Our analysis found 28 genes which are mostly likely associated with an increased risk for AMI, including: PAI-1, CX37, IL18, and others. Also, a correlation was made between the results obtained in the big data analysis and the results of the review. The most important genes increasing the risk for AMI are lymphotoxin-a gene (LTA), LGALS2, LDLR, and APOA5. A deeper understanding of the underlying functional genomic circuits may present new opportunities for research in the future.
引用
收藏
页数:10
相关论文
共 34 条
[1]  
Alfakih K, 2007, Atherosclerosis, V195, pe32, DOI 10.1016/j.atherosclerosis.2007.01.028
[2]   Genetic Variants Associated With Myocardial Infarction Risk Factors in Over 8000 Individuals From Five Ethnic Groups The INTERHEART Genetics Study [J].
Anand, Sonia S. ;
Xie, Changchun ;
Pare, Guillaume ;
Montpetit, Alexandre ;
Rangarajan, Sumathy ;
McQueen, Matthew J. ;
Cordell, Heather J. ;
Keavney, Bernard ;
Yusuf, Salim ;
Hudson, Thomas J. ;
Engert, James C. .
CIRCULATION-CARDIOVASCULAR GENETICS, 2009, 2 (01) :16-U36
[3]   Acute myocardial infarction [J].
Boateng, Stephen ;
Sanborn, Timothy .
DM DISEASE-A-MONTH, 2013, 59 (03) :83-96
[4]   A genetic polymorphism in connexin 37 as a prognostic marker for atherosclerotic plaque development [J].
Boerma, M ;
Forsberg, L ;
Van Zeijl, L ;
Morgenstern, R ;
De Faire, U ;
Lemne, C ;
Erlinge, D ;
Thulin, T ;
Hong, Y ;
Cotgreave, IA .
JOURNAL OF INTERNAL MEDICINE, 1999, 246 (02) :211-218
[5]   High Anthocyanin Intake Is Associated With a Reduced Risk of Myocardial Infarction in Young and Middle-Aged Women [J].
Cassidy, Aedin ;
Mukamal, Kenneth J. ;
Liu, Lydia ;
Franz, Mary ;
Eliassen, A. Heather ;
Rimm, Eric B. .
CIRCULATION, 2013, 127 (02) :188-196
[6]  
DAWSON SJ, 1993, J BIOL CHEM, V268, P10739
[7]   Exome sequencing identifies rare LDLR and APOA5 alleles conferring risk for myocardial infarction [J].
Do, Ron ;
Stitziel, Nathan O. ;
Won, Hong-Hee ;
Jorgensen, Anders Berg ;
Duga, Stefano ;
Merlini, Pier Angelica ;
Kiezun, Adam ;
Farrall, Martin ;
Goel, Anuj ;
Zuk, Or ;
Guella, Illaria ;
Asselta, Rosanna ;
Lange, Leslie A. ;
Peloso, Gina M. ;
Auer, Paul L. ;
Girelli, Domenico ;
Martinelli, Nicola ;
Farlow, Deborah N. ;
DePristo, Mark A. ;
Roberts, Robert ;
Stewart, Alexander F. R. ;
Saleheen, Danish ;
Danesh, John ;
Epstein, Stephen E. ;
Sivapalaratnam, Suthesh ;
Hovingh, G. Kees ;
Kastelein, John J. ;
Samani, Nilesh J. ;
Schunkert, Heribert ;
Erdmann, Jeanette ;
Shah, Svati H. ;
Kraus, William E. ;
Davies, Robert ;
Nikpay, Majid ;
Johansen, Christopher T. ;
Wang, Jian ;
Hegele, Robert A. ;
Hechter, Eliana ;
Marz, Winfried ;
Kleber, Marcus E. ;
Huang, Jie ;
Johnson, Andrew D. ;
Li, Mingyao ;
Burke, Greg L. ;
Gross, Myron ;
Liu, Yongmei ;
Assimes, Themistocles L. ;
Heiss, Gerardo ;
Lange, Ethan M. ;
Folsom, Aaron R. .
NATURE, 2015, 518 (7537) :102-+
[8]   ALLELE-SPECIFIC INCREASE IN BASAL TRANSCRIPTION OF THE PLASMINOGEN-ACTIVATOR INHIBITOR-1 GENE IS ASSOCIATED WITH MYOCARDIAL-INFARCTION [J].
ERIKSSON, P ;
KALLIN, B ;
VANTHOOFT, FM ;
BAVENHOLM, P ;
HAMSTEN, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (06) :1851-1855
[9]   Risk gene identification and support vector machine learning to construct an early diagnosis model of myocardial infarction [J].
Fang, Hong-Zhi ;
Hu, Dan-Li ;
Li, Qin ;
Tu, Su .
MOLECULAR MEDICINE REPORTS, 2020, 22 (03) :1775-1782
[10]   HIV Infection and the Risk of Acute Myocardial Infarction [J].
Freiberg, Matthew S. ;
Chang, Chung-Chou H. ;
Kuller, Lewis H. ;
Skanderson, Melissa ;
Lowy, Elliott ;
Kraemer, Kevin L. ;
Butt, Adeel A. ;
Goetz, Matthew Bidwell ;
Leaf, David ;
Oursler, Kris Ann ;
Rimland, David ;
Barradas, Maria Rodriguez ;
Brown, Sheldon ;
Gibert, Cynthia ;
McGinnis, Kathy ;
Crothers, Kristina ;
Sico, Jason ;
Crane, Heidi ;
Warner, Alberta ;
Gottlieb, Stephen ;
Gottdiener, John ;
Tracy, Russell P. ;
Budoff, Matthew ;
Watson, Courtney ;
Armah, Kaku A. ;
Doebler, Donna ;
Bryant, Kendall ;
Justice, Amy C. .
JAMA INTERNAL MEDICINE, 2013, 173 (08) :614-622