Asparagine and glutamine side-chains can form hydrogen-bonded ladders which contribute significantly to the stability of amyloid fibrils. We show, using the example of HET-s(218-289) fibrils, that the primary amide side-chain proton resonances can be detected in cross-polarization based solid-state NMR spectra at fast magic-angle spinning (MAS).J-coupling based experiments offer the possibility to distinguish them from backbone amide groups if the spin-echo lifetimes are long enough, which turned out to be the case for the glutamine side-chains, but not for the asparagine side-chains forming asparagine ladders. We explore the sensitivity of NMR observables to asparagine ladder formation. One of the two possible asparagine ladders in HET-s(218-289), the one comprising N226 and N262, is assigned by proton-detected 3D experiments at fast MAS and significant de-shielding of one of the NH(2)proton resonances indicative of hydrogen-bond formation is observed. Small rotating-frame(15)N relaxation-rate constants point to rigidified asparagine side-chains in this ladder. The proton resonances are homogeneously broadened which could indicate chemical exchange, but is presently not fully understood. The second asparagine ladder (N243 and N279) in contrast remains more flexible.
机构:Univ Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
Sawaya, Michael R.
Sambashivan, Shilpa
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机构:Univ Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
Sambashivan, Shilpa
Nelson, Rebecca
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Nelson, Rebecca
Ivanova, Magdalena I.
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Ivanova, Magdalena I.
Sievers, Stuart A.
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Sievers, Stuart A.
Apostol, Marcin I.
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Apostol, Marcin I.
Thompson, Michael J.
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Thompson, Michael J.
Balbirnie, Melinda
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Balbirnie, Melinda
Wiltzius, Jed J. W.
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Wiltzius, Jed J. W.
McFarlane, Heather T.
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McFarlane, Heather T.
Madsen, Anders O.
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Madsen, Anders O.
Riekel, Christian
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Riekel, Christian
Eisenberg, David
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Univ Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USAUniv Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
机构:Univ Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
Sawaya, Michael R.
Sambashivan, Shilpa
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机构:Univ Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
Sambashivan, Shilpa
Nelson, Rebecca
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Nelson, Rebecca
Ivanova, Magdalena I.
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Ivanova, Magdalena I.
Sievers, Stuart A.
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机构:Univ Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
Sievers, Stuart A.
Apostol, Marcin I.
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Apostol, Marcin I.
Thompson, Michael J.
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Thompson, Michael J.
Balbirnie, Melinda
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机构:Univ Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
Balbirnie, Melinda
Wiltzius, Jed J. W.
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机构:Univ Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
Wiltzius, Jed J. W.
McFarlane, Heather T.
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机构:Univ Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
McFarlane, Heather T.
Madsen, Anders O.
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机构:Univ Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
Madsen, Anders O.
Riekel, Christian
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机构:Univ Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USA
Riekel, Christian
Eisenberg, David
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Univ Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USAUniv Calif Los Angeles, DOE Inst Genom & Proteom, Howard Hughes Med Inst, Los Angeles, CA 90095 USA