Tautomerism of Uracil Probed via Infrared Spectroscopy of Singly Hydrated Protonated Uracil

被引:100
作者
Bakker, Joost M. [2 ]
Sinha, Rajeev K. [1 ]
Besson, Thierry [1 ]
Brugnara, Maurizio [1 ,3 ]
Tosi, Paolo [3 ]
Salpin, Jean-Yves [4 ]
Maitre, Philippe [1 ]
机构
[1] Univ Paris 11, Fac Sci, CNRS, UMR 8000,Lab Chim Phys, F-91405 Orsay, France
[2] FOM, Inst Plasma Phys Rijnhuizen, NL-3439 MN Nieuwegein, Netherlands
[3] Univ Trent, Dipartimento Fis, I-38100 Povo, Italy
[4] Univ Evry Val dEssone, Lab Anal & Modelisat Biol & Environm, CNRS, F-91025 Evry, France
关键词
D O I
10.1021/jp806396t
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Tautomerism of the nucleobase uracil is characterized in the gas phase through IR photodissociation spectroscopy of singly hydrated protonated uracil created with tandem mass spectrometric methods in a commercially available Fourier transform ion cyclotron resonance mass spectrometer. Protonated Uracil ions generated by electrospray ionization are re-solvated ill a low-pressure collision cell filled with a mixture of water vapor seeded in argon. Their structure is investigated by IR photodissociation spectroscopy in the NH and OH stretching region (2500-3800 cm(-1)) with a tabletop IR laser Source and in the 1000-2000 cm(-1) range with a free-electron laser. In both regions the IR photodissociation spectrum exhibits well-resolved spectral signatures that point to the presence of two different types of structure for monohydrated protonated uracil, which result from the two lowest-energy tautomers of uracil. Ab initio calculations confirm that no water-catalyzed tautomerization occurs during the re-solvation process, indicating that the two protonated forms of uracil directly originate from the electrospray process.
引用
收藏
页码:12393 / 12400
页数:8
相关论文
共 46 条
[1]   Understanding the infrared spectrum of bare CH5+ [J].
Asvany, O ;
Kumar, P ;
Redlich, B ;
Hegemann, I ;
Schlemmer, S ;
Marx, D .
SCIENCE, 2005, 309 (5738) :1219-1222
[2]   Gas-phase structure of a π-allyl-palladium complex:: Efficient infrared Spectroscopy in a 7 T Fourier transform mass spectrometer [J].
Bakker, Joost M. ;
Besson, Thierry ;
Lemaire, Joeel ;
Scuderi, Debora ;
Maitre, Philippe .
JOURNAL OF PHYSICAL CHEMISTRY A, 2007, 111 (51) :13415-13424
[3]   Theoretical study of the interaction between thymine and water. Protonation and deprotonation enthalpies and comparison with uracil [J].
Chandra, AK ;
Nguyen, MT ;
Zeegers-Huyskens, T .
JOURNAL OF PHYSICAL CHEMISTRY A, 1998, 102 (29) :6010-6016
[4]  
Chandra AK, 1999, J PHYS CHEM A, V103, P8853
[5]   The structure of protonated acetone and its dimer:: infrared photodissociation spectroscopy from 800 to 4000 cm-1 [J].
Douberly, Gary E. ;
Ricks, Allen M. ;
Ticknor, Brian W. ;
Duncan, Michael A. .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2008, 10 (01) :77-79
[6]   IR-spectroscopic characterization of acetophenone complexes with Fe+, Co+, and Ni+ using free-electron-laser IRMPD [J].
Dunbar, Robert C. ;
Moore, David T. ;
Oomens, Jos .
JOURNAL OF PHYSICAL CHEMISTRY A, 2006, 110 (27) :8316-8326
[7]  
ELLIOT BM, 2008, J CHEM PHYS IN PRESS
[8]   ELECTROSPRAY IONIZATION FOR MASS-SPECTROMETRY OF LARGE BIOMOLECULES [J].
FENN, JB ;
MANN, M ;
MENG, CK ;
WONG, SF ;
WHITEHOUSE, CM .
SCIENCE, 1989, 246 (4926) :64-71
[9]  
FRANKKAMENETSKI.MD, 1995, ANNU REV BIOCHEM, V64, P62
[10]  
Frisch M. J., 2004, GAUSSIAN 03