Molecular characterization of novel haplotypes of eIF4E family in Chinese cabbage (Brassica rapa L. ssp pekinensis)

被引：0

作者：

Liu, Shuan-Tao ^{[1
]}

Zhang, Zhi-Gang ^{[1
]}

Li, Qiao-Yun ^{[1
]}

Wang, Shu-Fen ^{[1
]}

Zhao, Zhi-Zhong ^{[1
]}

Lu, Jin-Dong ^{[1
]}

Xu, Wen-Ling ^{[1
]}

Liu, Xian-Xian ^{[1
]}

Fu, Wei-Min ^{[1
]}

机构：

[1] Shandong Acad Agr Sci, Shandong Key Lab Biol Greenhouse Vegetables, Natl Improvement Ctr Vegetables, Shandong Branch,Vegetable Inst, Jinan 250100, Shandong, Peoples R China

来源：

GENES & GENOMICS | 2013年 / 35卷 / 06期

关键词：

Brassica rapa; eIF4E family; Polymorphism; Haplotype; Mutation; TURNIP-MOSAIC-VIRUS; TRANSLATION INITIATION-FACTORS; ARABIDOPSIS-THALIANA; POTYVIRUS RESISTANCE; GENOME; 4E; SUSCEPTIBILITY; PROTEIN; GENE; EIF(ISO)4E;

D O I：

10.1007/s13258-013-0128-y

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Two genes coding for eukaryotic translation initiation factors, eIF4E.a and eIF4E.c, were isolated from twelve accessions of Chinese cabbage (Brassica rapa L. ssp. pekinensis). Polymorphism analysis revealed that 94 and 142 polymorphic sites were characterized from allele of BraeIF4E.a and BraeIF4E.c which produced complex haplotype structures. Six novel haplotypes were characterized from the two alleles respectively. Among the six novel haplotypes of BraeIF4E.a, three loss-of-function mutations were identified in which a conserved single nucleotide deletion mutation cause the early termination of BraeIF4E.a coding product; while for six new BraeIF4E.c haplotypes, their coding product show amino acid substitution mutations on non-conservative amino acid residues which might affect TuMV infection in Chinese cabbage.

引用

页码：777 / 785

页数：9

共 32 条

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