The Role of Stochastic Models in Interpreting the Origins of Biological Chirality

被引:39
作者
Lente, Gabor [1 ]
机构
[1] Univ Debrecen, Dept Inorgan & Analyt Chem, H-4010 Debrecen, Hungary
来源
SYMMETRY-BASEL | 2010年 / 2卷 / 02期
关键词
absolute asymmetric synthesis; Soai reaction; stochastic kinetics; enantiomeric excess distributions; biological chirality; chiral fluctuations; ABSOLUTE ASYMMETRIC-SYNTHESIS; SYMMETRY-BREAKING; NONEQUILIBRIUM THERMODYNAMICS; DETERMINISTIC MODELS; PARITY VIOLATION; KINETIC-MODELS; AUTOCATALYSIS; AMPLIFICATION; GENERATION; CRYSTALLIZATION;
D O I
10.3390/sym2020767
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
This review summarizes recent stochastic modeling efforts in the theoretical research aimed at interpreting the origins of biological chirality. Stochastic kinetic models, especially those based on the continuous time discrete state approach, have great potential in modeling absolute asymmetric reactions, experimental examples of which have been reported in the past decade. An overview of the relevant mathematical background is given and several examples are presented to show how the significant numerical problems characteristic of the use of stochastic models can be overcome by non-trivial, but elementary algebra. In these stochastic models, a particulate view of matter is used rather than the concentration-based view of traditional chemical kinetics using continuous functions to describe the properties system. This has the advantage of giving adequate description of single-molecule events, which were probably important in the origin of biological chirality. The presented models can interpret and predict the random distribution of enantiomeric excess among repetitive experiments, which is the most striking feature of absolute asymmetric reactions. It is argued that the use of the stochastic kinetic approach should be much more widespread in the relevant literature.
引用
收藏
页码:767 / 798
页数:32
相关论文
共 92 条
[1]  
ARANYI P, 1977, ACTA BIOCHIM BIOPHYS, V12, P375
[2]   Conditions for chiral asymmetry generation in the preparation of the chiral octahedral cobalt complex [J].
Asakura, K ;
Osanai, S ;
Kondepudi, DK .
CHIRALITY, 2001, 13 (08) :435-440
[3]   Formation of the intermediate, aquohydroxobis (ethylenediamine)cobalt(III) complex, in the preparation of cis-bromoamminebis (ethylenediamine)cobalt(III) bromide by the reaction of bis[bis(ethylenediamine)cobalt(III)-μ-dihydroxo]diaquocobalt(II) sulfate with ammonium bromide in water [J].
Asakura, K ;
Inoue, K ;
Osanai, S ;
Kondepudi, DK .
JOURNAL OF COORDINATION CHEMISTRY, 1998, 46 (02) :159-164
[4]  
Asakura K, 1998, CHIRALITY, V10, P343, DOI 10.1002/(SICI)1520-636X(1998)10:4<343::AID-CHIR9>3.0.CO
[5]  
2-8
[6]   Random chiral asymmetry generation by chiral autocatalysis in a far-from-equilibrium reaction system [J].
Asakura, K ;
Ikumo, A ;
Kurihara, K ;
Osanai, S ;
Kondepudi, DK .
JOURNAL OF PHYSICAL CHEMISTRY A, 2000, 104 (12) :2689-2694
[7]  
BARABAS B, 2008, AIP C P B, V963, P1150
[8]   Isotope chirality and asymmetric autocatalysis:: A possible entry to biological chirality [J].
Barabas, Bela ;
Caglioti, Luciano ;
Micskei, Karoly ;
Zucchi, Claudia ;
Palyi, Gyula .
ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES, 2008, 38 (04) :317-327
[9]   Violation of distribution symmetry in statistical evaluation of absolute enantioselective synthesis [J].
Barabas, Bela ;
Caglioti, Luciano ;
Zucchi, Claudia ;
Maioli, Marco ;
Gal, Emese ;
Micskei, Karoly ;
Palyi, Gyula .
JOURNAL OF PHYSICAL CHEMISTRY B, 2007, 111 (39) :11506-11510
[10]   Data-Based Stochastic Approach to Absolute Asymmetric Synthesis by Autocatalysis [J].
Barabas, Bela ;
Caglioti, Luciano ;
Micskei, Karoly ;
Palyi, Gyula .
BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN, 2009, 82 (11) :1372-1376