Polyphasic characterization of Plectosphaerella oligotrophica, a new oligotrophic species from China

被引:13
作者
Liu, Ting-Ting [1 ,2 ]
Hu, Dian-Ming [2 ]
Liu, Fang [2 ]
Cai, Lei [2 ]
机构
[1] Chinese Acad Forestry, Res Inst Trop Forestry, Guangzhou 510520, Guangdong, Peoples R China
[2] Chinese Acad Sci, Inst Microbiol, State Key Lab Mycol, Beijing 100101, Peoples R China
关键词
Oligotrophs; Phylogeny; Soil; Taxonomy; DNA; FUNGI; INFERENCE; MRBAYES; GROWTH; GENUS;
D O I
10.1016/j.myc.2013.01.003
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Oligotrophic fungi can grow on carbon-free media. Most of the currently known oligotrophic fungi were reported from soil. Plectosphaerella oligotrophica sp. nov. was recently isolated from soil in China using a low carbon medium. The new species is morphologically characterized by pale yellow colonies on PDA, phialidic conidiogenous cells, and hyaline, ellipsoidal and 0-1-septate conidia. Phylogenetic analysis based on internal transcribed spacer (ITS) and large subunit (LSU) rDNA sequences confirmed the placement of P. oligotrophica as a new species in the genus Plectosphaerella. The new species is compared to the morphologically and phylogenetically closely related species. Beta-tubulin fragments from the new species were also sequenced and deposited in GenBank. A key to the currently accepted species of the genus is provided. (C) 2013 The Mycological Society of Japan. Published by Elsevier B. V. All rights reserved.
引用
收藏
页码:387 / 393
页数:7
相关论文
共 36 条
  • [1] Plectosphaerella species associated with root and collar rots of horticultural crops in southern Italy
    Carlucci, A.
    Raimondo, M. L.
    Santos, J.
    Phillips, A. J. L.
    [J]. PERSOONIA, 2012, 28 : 34 - 48
  • [2] High-throughput culturing of fungi from plant litter by a dilution-to-extinction technique
    Collado, Javier
    Platas, Gonzalo
    Paulus, Barbara
    Bills, Gerald F.
    [J]. FEMS MICROBIOLOGY ECOLOGY, 2007, 60 (03) : 521 - 533
  • [3] Domsch K.H., 1972, Fungi in agricultural soils
  • [4] Elbakyan M. A., 1970, Trudy Vsesoyuznogo nauchno-issledovatel'skogo Instituta Zashchity Rastenii, V29, P116
  • [5] Gherbawy Y, 2010, MOLECULAR IDENTIFICATION OF FUNGI, P213, DOI 10.1007/978-3-642-05042-8_11
  • [6] DEVELOPMENT OF PRIMER SETS DESIGNED FOR USE WITH THE PCR TO AMPLIFY CONSERVED GENES FROM FILAMENTOUS ASCOMYCETES
    GLASS, NL
    DONALDSON, GC
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1995, 61 (04) : 1323 - 1330
  • [7] MRBAYES: Bayesian inference of phylogenetic trees
    Huelsenbeck, JP
    Ronquist, F
    [J]. BIOINFORMATICS, 2001, 17 (08) : 754 - 755
  • [8] Phylogenetics and Taxonomy of the Fungal Vascular Wilt Pathogen Verticillium, with the Descriptions of Five New Species
    Inderbitzin, Patrik
    Bostock, Richard M.
    Davis, R. Michael
    Usami, Toshiyuki
    Platt, Harold W.
    Subbarao, Krishna V.
    [J]. PLOS ONE, 2011, 6 (12):
  • [9] OXIDATION OF THIOSULFATE BY FUSARIUM-OXYSPORUM GROWN UNDER OLIGOTROPHIC CONDITIONS
    JONES, R
    PARKINSON, SM
    WAINWRIGHT, M
    KILLHAM, K
    [J]. MYCOLOGICAL RESEARCH, 1991, 95 : 1169 - 1174
  • [10] EVALUATION OF THE MAXIMUM-LIKELIHOOD ESTIMATE OF THE EVOLUTIONARY TREE TOPOLOGIES FROM DNA-SEQUENCE DATA, AND THE BRANCHING ORDER IN HOMINOIDEA
    KISHINO, H
    HASEGAWA, M
    [J]. JOURNAL OF MOLECULAR EVOLUTION, 1989, 29 (02) : 170 - 179