Structure-function relationships of EcDOS, a heme-regulated phosphodiesterase from Escherichia coli

被引:61
作者
Sasakura, Y [1 ]
Yoshimura-Suzuki, T
Kurokawa, H
Shimizu, T
机构
[1] Hitachi High Technol Corp, Biomed Ctr, R&D Div, Nanotechnol Prod Business Grp, Ibaraki 3128504, Japan
[2] Tohoku Univ, Inst Multidisciplinary Res Adv Mat, Aoba Ku, Sendai, Miyagi 9808577, Japan
关键词
D O I
10.1021/ar0501525
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Recent studies have revealed a new class of heme enzymes, the heme-based sensors, which are able to turn on or off cellular signal transduction pathways in response to environmental changes. One of these enzymes is the heme-regulated phosphodiesterase from Escherichia coli (EcDOS). This protein is composed of an N-terminal heme-containing PAS domain and a C-terminal functional domain. PAS is an acronym formed from the names of the Drosophila period clock protein (PER),(5) vertebrate aryl hydrocarbon receptor nuclear translocator (ARNT),(6) and Drosophila single-minded protein (SIM). The heme cofactor in its PAS domain can act as a sensor of the cellular redox state that regulates the adenosine 3',5'-cyclic monophosphate (cAMP) phosphodiesterase activity. The crystal structures of its heme-containing PAS domain have helped clarify how the heme redox-dependent structural changes initiate intramolecular signal transduction. Here, we review recent findings on the structure-function relationships of EcDOS.
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页码:37 / 43
页数:7
相关论文
共 65 条
[1]   Structure and interactions of PAS kinase N-terminal PAS domain: Model for intramolecular kinase regulation [J].
Amezcua, CA ;
Harper, SM ;
Rutter, J ;
Gardner, KH .
STRUCTURE, 2002, 10 (10) :1349-1361
[2]  
Antonini E., 1971, Hemoglobin and myoglobin in their reactions with ligands
[3]   A novel heme protein that acts as a carbon monoxide-dependent transcriptional activator in Rhodospirillum rubrum [J].
Aono, S ;
Nakajima, H ;
Saito, K ;
Okada, M .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1996, 228 (03) :752-756
[4]   Biochemical and biophysical properties of the CO-sensing transcriptional activator CooA [J].
Aono, S .
ACCOUNTS OF CHEMICAL RESEARCH, 2003, 36 (11) :825-831
[5]  
Ausmees N, 2001, FEMS MICROBIOL LETT, V204, P163, DOI 10.1111/j.1574-6968.2001.tb10880.x
[6]   Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins [J].
Bateman, A ;
Birney, E ;
Durbin, R ;
Eddy, SR ;
Finn, RD ;
Sonnhammer, ELL .
NUCLEIC ACIDS RESEARCH, 1999, 27 (01) :260-262
[7]   A molecular basis for NO selectivity in soluble guanylate cyclase [J].
Boon, EM ;
Huang, SH ;
Marletta, MA .
NATURE CHEMICAL BIOLOGY, 2005, 1 (01) :53-59
[8]   Phosphodiesterase A1, a regulator of cellulose synthesis in Acetobacter xylinum, is a heme-based sensor [J].
Chang, AL ;
Tuckerman, JR ;
Gonzalez, G ;
Mayer, R ;
Weinhouse, H ;
Volman, G ;
Amikam, D ;
Benziman, M ;
Gilles-Gonzalez, MA .
BIOCHEMISTRY, 2001, 40 (12) :3420-3426
[9]   Identification and characterization of a cyclic di-GMP-specific phosphodiesterase and its allosteric control by GTP [J].
Christen, M ;
Christen, B ;
Folcher, M ;
Schauerte, A ;
Jenal, U .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (35) :30829-30837
[10]  
Delano WL., 2002, The PyMOL Molecular Graphics System