General and hybrid correlation nuclear magnetic resonance analysis of phosphorus in Phytophthora palmivora

被引:5
作者
Kirwan, Gemma M. [1 ]
Fernandez, David I. [1 ]
Niere, Julie O. [1 ]
Adams, Michael J. [1 ]
机构
[1] RMIT Univ, Sch Appl Sci, Melbourne, Vic 3001, Australia
关键词
Two-dimensional correlation spectroscopy; P-31 NMR spectroscopy; Chemometrics; Phytophthora palmivora; In vivo NMR spectroscopy; Metabonomics; Hybrid correlation; CORRELATION SPECTROSCOPY; INFORMATION RECOVERY; NMR; POLYPHOSPHATE; METABONOMICS;
D O I
10.1016/j.ab.2012.06.020
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Generalized two-dimensional (Gen2D) correlation analysis and hybrid correlation analysis have been applied to a series of dynamic P-31 nuclear magnetic resonance (NMR) spectra to monitor the in vivo metabolic changes of the plant pathogen Phytophthora palmivora in the presence and absence of phosphonate over an 18-h period. Results indicate that phosphonate exposure causes cleavage in organism polyphosphate chains as well as an increase in total sugar phosphates. In the presence of phosphonate, the NMR resonances attributed to terminal polyphosphate phosphorus reduced at a lower rate than those of middle polyphosphate phosphorus, indicating a change in average chain length and suggesting cleavage in the middle of the chain as well as at the ends. The correlation analysis techniques serve to identify and confirm spectral regions undergoing major change in the time-series data and facilitate the analysis of these dynamic changes. (C) 2012 Elsevier Inc. All rights reserved.
引用
收藏
页码:1 / 7
页数:7
相关论文
共 35 条
[1]   NMR and plant metabolism [J].
Bligny, R ;
Douce, R .
CURRENT OPINION IN PLANT BIOLOGY, 2001, 4 (03) :191-196
[2]   PROPERTIES OF POLYPHOSPHATE - AMP PHOSPHOTRANSFERASE OF ACINETOBACTER STRAIN-210A [J].
BONTING, CFC ;
KORTSTEE, GJJ ;
ZEHNDER, AJB .
JOURNAL OF BACTERIOLOGY, 1991, 173 (20) :6484-6488
[3]  
Chen K.Y., 1999, PROGR MOL SUBCELLULA
[4]   Statistical total correlation spectroscopy:: An exploratory approach for latent biomarker identification from metabolic 1H NMR data sets [J].
Cloarec, O ;
Dumas, ME ;
Craig, A ;
Barton, RH ;
Trygg, J ;
Hudson, J ;
Blancher, C ;
Gauguier, D ;
Lindon, JC ;
Holmes, E ;
Nicholson, J .
ANALYTICAL CHEMISTRY, 2005, 77 (05) :1282-1289
[5]   Scaling and normalization effects in NMR spectroscopic metabonomic data sets [J].
Craig, A ;
Cloareo, O ;
Holmes, E ;
Nicholson, JK ;
Lindon, JC .
ANALYTICAL CHEMISTRY, 2006, 78 (07) :2262-2267
[6]  
CRAMER CL, 1984, J BIOL CHEM, V259, P5152
[7]   Advances of high-resolution NMR techniques in the structural and metabolic analysis of plant biochemistry [J].
Eisenreich, Wolfgang ;
Bacher, Adelbert .
PHYTOCHEMISTRY, 2007, 68 (22-24) :2799-2815
[8]  
Fernandez D.I., 2007, APPL CHEM HONOURS, P96
[9]  
Jung YM, 2003, B KOR CHEM SOC, V24, P1345
[10]   Peak width issues with generalised 2D correlation NMR spectroscopy [J].
Kirwan, Gemma M. ;
Adams, Michael J. .
JOURNAL OF MOLECULAR STRUCTURE, 2008, 892 (1-3) :225-230