Phylogenetic evidence for the rapid evolution of human B19 erythrovirus

被引:105
作者
Shackelton, LA
Holmes, EC [1 ]
机构
[1] Penn State Univ, Dept Biol, Ctr Infect Dis Dynam, Mueller Lab, University Pk, PA 16802 USA
[2] Univ Oxford, Dept Zool, Oxford OX1 3PS, England
关键词
D O I
10.1128/JVI.80.7.3666-3669.2006
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Human B19 erythrovirus is a ubiquitous viral pathogen, commonly infecting individuals before adulthood. As with all autonomous parvoviruses, its small single-stranded DNA genome is replicated with host cell machinery. While the mechanism of parvovirus genome replication has been studied in detail, the rate at which B19 virus evolves is unknown. By inferring the phylogenetic history and evolutionary dynamics of temporally sampled B19 sequences, we observed a surprisingly high rate of evolutionary change, at approximately 10(-4) nucleotide substitutions per site per year. This rate is more typical of RNA viruses and suggests that high mutation rates are characteristic of the Parvoviridae.
引用
收藏
页码:3666 / 3669
页数:4
相关论文
共 22 条
[1]  
Bernard Hans-Ulrich, 1994, Trends in Microbiology, V2, P140, DOI 10.1016/0966-842X(94)90602-5
[2]  
Brown KE, 2004, DEV BIOLOGICALS, V118, P71
[3]  
COSSART YE, 1975, LANCET, V1, P72
[4]   A CONSTANT RATE OF SPONTANEOUS MUTATION IN DNA-BASED MICROBES [J].
DRAKE, JW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1991, 88 (16) :7160-7164
[5]   Bayesian Phylogenetics with BEAUti and the BEAST 1.7 [J].
Drummond, Alexei J. ;
Suchard, Marc A. ;
Xie, Dong ;
Rambaut, Andrew .
MOLECULAR BIOLOGY AND EVOLUTION, 2012, 29 (08) :1969-1973
[6]   Sequence heterogeneity of TT virus and closely related viruses [J].
Khudyakov, YE ;
Cong, ME ;
Nichols, B ;
Reed, D ;
Dou, XG ;
Viazov, SO ;
Chang, J ;
Fried, MW ;
Williams, I ;
Bower, W ;
Lambert, S ;
Purdy, M ;
Roggendorf, M ;
Fields, HA .
JOURNAL OF VIROLOGY, 2000, 74 (07) :2990-3000
[7]   MOLECULAR PHYLOGENY AND EVOLUTIONARY TIMESCALE FOR THE FAMILY OF MAMMALIAN HERPESVIRUSES [J].
MCGEOCH, DJ ;
COOK, S ;
DOLAN, A ;
JAMIESON, FE ;
TELFORD, EAR .
JOURNAL OF MOLECULAR BIOLOGY, 1995, 247 (03) :443-458
[8]   Antibody responses in parvovirus B19 infected patients [J].
Modrow, S ;
Dorsch, S .
PATHOLOGIE BIOLOGIE, 2002, 50 (05) :326-331
[9]   Molecular epidemiology of TT virus (TTV) and characterization of two novel TTV genotypes in Indonesia [J].
Muljono, DH ;
Nishizawa, T ;
Tsuda, F ;
Takahashi, M ;
Okamoto, H .
ARCHIVES OF VIROLOGY, 2001, 146 (07) :1249-1266
[10]  
MUZYCZKA N, 2001, FUNDAMENTAL VIROLOGY, V4, P1089