Physical principles of intracellular organization via active and passive phase transitions

被引:318
作者
Berry, Joel [1 ,3 ]
Brangwynne, Clifford P. [2 ]
Haataja, Mikko [1 ]
机构
[1] Princeton Univ, Dept Mech & Aerosp Engn, Princeton, NJ 08544 USA
[2] Princeton Univ, Dept Chem & Biol Engn, Princeton, NJ 08544 USA
[3] Univ Penn, Dept Mat Sci & Engn, 3231 Walnut St, Philadelphia, PA 19104 USA
关键词
phase separation; intracellular condensates; bimolecular organization; self-assembly; organelles; RNA; proteins; MOLECULAR-SIZE DISTRIBUTION; MONTE-CARLO SIMULATIONS; CELL-FREE FORMATION; PRION-LIKE DOMAINS; CRYSTAL NUCLEATION; SPINODAL DECOMPOSITION; IRREVERSIBLE-PROCESSES; COMPLEX COACERVATION; RECIPROCAL RELATIONS; DISORDERED PROTEINS;
D O I
10.1088/1361-6633/aaa61e
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Exciting recent developments suggest that phase transitions represent an important and ubiquitous mechanism underlying intracellular organization. We describe key experimental findings in this area of study, as well as the application of classical theoretical approaches for quantitatively understanding these data. We also discuss the way in which equilibrium thermodynamic driving forces may interface with the fundamentally out-of-equilibrium nature of living cells. In particular, time and/or space-dependent concentration profiles may modulate the phase behavior of biomolecules in living cells. We suggest future directions for both theoretical and experimental work that will shed light on the way in which biological activity modulates the assembly, properties, and function of viscoelastic states of living matter.
引用
收藏
页数:42
相关论文
共 212 条
[1]   Phase Separation: Linking Cellular Compartmentalization to Disease [J].
Aguzzi, Adriano ;
Altmeyer, Matthias .
TRENDS IN CELL BIOLOGY, 2016, 26 (07) :547-558
[2]   Are aberrant phase transitions a driver of cellular aging? [J].
Alberti, Simon ;
Hyman, Anthony A. .
BIOESSAYS, 2016, 38 (10) :959-968
[3]   Reversible compartmentalization of de novo purine biosynthetic complexes in living cells [J].
An, Songon ;
Kumar, Ravindra ;
Sheets, Erin D. ;
Benkovic, Stephen J. .
SCIENCE, 2008, 320 (5872) :103-106
[4]  
[Anonymous], 2002, NONSMOOTH THERMOMECH, DOI DOI 10.1007/978-3-662-04800-9
[5]  
[Anonymous], 1971, INT SERIES MONOGRAPH
[6]   Experimental models for dynamic compartmentalization of biomolecules in liquid organelles: Reversible formation and partitioning in aqueous biphasic systems [J].
Aumiller, William M., Jr. ;
Keating, Christine D. .
ADVANCES IN COLLOID AND INTERFACE SCIENCE, 2017, 239 :75-87
[7]  
Aumiller WM, 2016, NAT CHEM, V8, P129, DOI [10.1038/NCHEM.2414, 10.1038/nchem.2414]
[8]   Granulation, Phase Change, and Microstructure - Kinetics of Phase Change. III [J].
Avrami, M .
JOURNAL OF CHEMICAL PHYSICS, 1941, 9 (02) :177-184
[9]   Kinetics of phase change I - General theory [J].
Avrami, M .
JOURNAL OF CHEMICAL PHYSICS, 1939, 7 (12) :1103-1112
[10]  
Avrami M., 1940, J Chem Phys, V8, P212, DOI [10.1063/1.1750631, DOI 10.1063/1.1750631]