Delayed Protein Synthesis Reduces the Correlation between mRNA and Protein Fluctuations

被引:64
作者
Gedeon, Tomas [1 ]
Bokes, Pavol [2 ]
机构
[1] Montana State Univ, Dept Math Sci, Bozeman, MT 59717 USA
[2] Comenius Univ, Dept Appl Math & Stat, Bratislava, Slovakia
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
STOCHASTIC GENE-EXPRESSION; ESCHERICHIA-COLI; MOLECULE; CELLS; TRANSCRIPTOME; DISTRIBUTIONS; TRANSLATION; ALGORITHM; NOISE;
D O I
10.1016/j.bpj.2012.06.025
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Recent experimental results indicate that, in single Escherichia coli cells, the fluctuations in mRNA level are uncorrelated with those of protein. However, a basic two-stage model for prokaryotic gene expression suggests that there ought to be a degree of correlation between the two. Therefore, it is important to investigate realistic modifications of the basic model that have the potential to reduce the theoretical level of the correlation. In this work, we focus on translational and reporter maturation delay, reporting that its introduction into the two-stage model reduces the cross correlation between instantaneous mRNA and protein levels. Our results indicate that the experimentally observed sample correlation coefficient between mRNA and protein levels may increase if the protein measurements are shifted back in time by the value of the delay.
引用
收藏
页码:377 / 385
页数:9
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