Animal social network inference and permutations for ecologists in R using asnipe

被引:274
作者
Farine, Damien R. [1 ]
机构
[1] Univ Oxford, Dept Zool, Edward Grey Inst, Oxford OX1 3PS, England
来源
METHODS IN ECOLOGY AND EVOLUTION | 2013年 / 4卷 / 12期
基金
欧洲研究理事会;
关键词
animal social networks; asnipe; lagged association rate; permutation test; R;
D O I
10.1111/2041-210X.12121
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
The sampling of animals for the purpose of measuring associations and interactions between individuals has led to the development of several statistical methods to deal with biases inherent in these data. However, these methods are typically computationally intensive and complex to implement. Here, I provide a software package that supports a range of these analyses in the R statistical computing environment. This package includes a novel approach to estimating re-association rates of time between frequently sampled individuals. I include extended demonstration of the syntax and examples of the ability for this software to interface with existing network analysis packages in R. This bridges a gap in the tools that are available to biologists wishing to analyse animal social networks in R.
引用
收藏
页码:1187 / 1194
页数:8
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