Colonization history of the western corn rootworm (&ITDiabrotica virgifera virgifera&IT) in North America: insights from random forest ABC using microsatellite data

被引:27
作者
Lombaert, Eric [1 ]
Ciosi, Marc [2 ]
Miller, Nicholas J. [3 ]
Sappington, Thomas W. [4 ]
Blin, Aurelie [1 ]
Guillemaud, Thomas [1 ]
机构
[1] Univ Cote dAzur, CNRS, INRA, ISA, 400 Route Chappes,167, F-06903 Sophia Antipolis, France
[2] Univ Glasgow, Inst Mol Cell & Syst Biol, Glasgow, Lanark, Scotland
[3] IIT, Dept Biol, 3101 S Dearborn St, Chicago, IL 60616 USA
[4] Iowa State Univ, USDA ARS, Corn Insects & Crop Genet Res Unit, Genet Lab, Ames, IA USA
关键词
Biological invasion; Invasion routes; Approximate Bayesian computation; Maize; APPROXIMATE BAYESIAN COMPUTATION; MULTIPLE TRANSATLANTIC INTRODUCTIONS; SINGLE NUCLEOTIDE POLYMORPHISM; POPULATION HISTORY; UNITED-STATES; MAIZE; COLEOPTERA; DIABROTICA; CHRYSOMELIDAE; INVASION;
D O I
10.1007/s10530-017-1566-2
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
First described from western Kansas, USA, the western corn rootworm, Diabrotica virgifera virgifera, is one of the worst pests of maize. The species is generally thought to be of Mexican origin and to have incidentally followed the expansion of maize cultivation into North America thousands of years ago. However, this hypothesis has never been investigated formally. In this study, the genetic variability of samples collected throughout North America was analysed at 13 microsatellite marker loci to explore precisely the population genetic structure and colonization history of D. v. virgifera. In particular, we used up-to-date approximate Bayesian computation methods based on random forest algorithms to test a Mexican versus a central-USA origin of the species, and to compare various possible timings of colonization. This analysis provided strong evidence that the origin of D. v. virgifera was southern (Mexico, or even further south). Surprisingly, we also found that the expansion of the species north of its origin was recent-probably not before 1100 years ago-thus indicating it was not directly associated with the early history of maize expansion out of Mexico, a far more ancient event.
引用
收藏
页码:665 / 677
页数:13
相关论文
共 80 条
  • [1] Anderson E., 1952, Agricultural History, V26, P2
  • [2] Beaumont MA, 2002, GENETICS, V162, P2025
  • [3] Using ABC and microsatellite data to detect multiple introductions of invasive species from a single source
    Benazzo, A.
    Ghirotto, S.
    Vilaca, S. T.
    Hoban, S.
    [J]. HEREDITY, 2015, 115 (03) : 262 - 272
  • [4] CONTROLLING THE FALSE DISCOVERY RATE - A PRACTICAL AND POWERFUL APPROACH TO MULTIPLE TESTING
    BENJAMINI, Y
    HOCHBERG, Y
    [J]. JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 1995, 57 (01) : 289 - 300
  • [5] Estimation of the dispersal of a major pest of maize by cline analysis of a temporary contact zone between two invasive outbreaks
    Bermond, Gerald
    Blin, Aurelie
    Vercken, Elodie
    Ravigne, Virginie
    Rieux, Adrien
    Mallez, Sophie
    Morel-Journel, Thibaut
    Guillemaud, Thomas
    [J]. MOLECULAR ECOLOGY, 2013, 22 (21) : 5368 - 5381
  • [6] Secondary Contact and Admixture between Independently Invading Populations of the Western Corn Rootworm, Diabrotica virgifera virgifera in Europe
    Bermond, Gerald
    Ciosi, Marc
    Lombaert, Eric
    Blin, Aurelie
    Boriani, Marco
    Furlan, Lorenzo
    Toepfer, Stefan
    Guillemaud, Thomas
    [J]. PLOS ONE, 2012, 7 (11):
  • [7] Reassessing the northern limit of maize consumption in North America: stable isotope, plant microfossil, and trace element content of carbonized food residue
    Boyd, M.
    Varney, T.
    Surette, C.
    Surette, J.
    [J]. JOURNAL OF ARCHAEOLOGICAL SCIENCE, 2008, 35 (09) : 2545 - 2556
  • [8] FEEDING AND OVIPOSITION BEHAVIOR AND LIFE-CYCLE STRATEGIES OF DIABROTICA - AN EVOLUTIONARY VIEW WITH IMPLICATIONS FOR PEST-MANAGEMENT (COLEOPTERA, CHRYSOMELIDAE)
    BRANSON, TF
    KRYSAN, JL
    [J]. ENVIRONMENTAL ENTOMOLOGY, 1981, 10 (06) : 826 - 831
  • [9] Random forests
    Breiman, L
    [J]. MACHINE LEARNING, 2001, 45 (01) : 5 - 32
  • [10] Buckler EdwardS., 2006, Darwin's Harvest: New Approaches to the Origins, Evolution, and Conservation of Crops, P67, DOI DOI 10.7312/MOTL13316-005/HTML