An ab initio molecular dynamics study on hydrogen bonds between water molecules

被引:19
|
作者
Pan, Zhang [4 ]
Chen, Jing [4 ]
Lu, Gang [3 ]
Geng, Yi-Zhao [2 ]
Zhang, Hui [1 ]
Ji, Qing [1 ]
机构
[1] Hebei Univ Technol, Dept Phys, Tianjin 300401, Peoples R China
[2] Beijing Normal Univ, Coll Nucl Sci & Technol, Beijing 100875, Peoples R China
[3] N China Elect Power Univ, Sch Math & Phys Sci, Baoding 071003, Peoples R China
[4] Tangshan Coll, Dept Basic Courses, Tangshan 063000, Peoples R China
来源
JOURNAL OF CHEMICAL PHYSICS | 2012年 / 136卷 / 16期
基金
中国国家自然科学基金;
关键词
ab initio calculations; bond angles; bond lengths; density functional theory; hydrogen bonds; intermolecular forces; molecular dynamics method; water; DENSITY-FUNCTIONAL THEORY; LIQUID WATER; NETWORK; METHANE; MODEL;
D O I
10.1063/1.4705371
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The quantitative estimation of the total interaction energy of a molecular system containing hydrogen bonds (H bonds) depends largely on how to identify H bonding. The conventional geometric criteria of H bonding are simple and convenient in application, but a certain amount of non-H bonding cases are also identified as H bonding. In order to investigate the wrong identification, we carry out a systematic calculation on the interaction energy of two water molecules at various orientation angles and distances using ab initio molecular dynamics method with the dispersion correction for the Becke-Lee-Yang-Parr (BLYP) functionals. It is shown that, at many orientation angles and distances, the interaction energies of the two water molecules exceed the energy criterion of the H bond, but they are still identified as H-bonded by the conventional "distance-angle" criteria. It is found that in these non-H bonding cases the wrong identification is mainly caused by short-range interaction between the two neighbouring water molecules. We thus propose that, in addition to the conventional distance and angle criteria of H bonding, the distance d(H center dot center dot center dot H) between the two neighbouring hydrogen atoms of the two water molecules should also be taken as a criterion, and the distance r(O center dot center dot center dot H) between the hydrogen atom of the H-bond donor molecule and the oxygen atom of the acceptor molecule should be restricted by a lower limit. When d(H center dot center dot center dot H) and r(O center dot center dot center dot H) are small (e. g., d(H center dot center dot center dot H) < 2.0 angstrom and r(O center dot center dot center dot H) < 1.62 angstrom), the repulsion between the two neighbouring atoms increases the total energy of the two water molecules dramatically and apparently weakens the binding of the water dimer. A statistical analysis and comparison of the numbers of the H bonds identified by using different criteria have been conducted on a Car-Parrinello ab initio molecular dynamics simulation with dispersion correction for a system of 64 water molecules at near-ambient temperature. They show that the majority of the H-bonds counted by using the conventional criteria combined with the d(H center dot center dot center dot H) criterion and the restriction of r(O center dot center dot center dot H) match what is identified by the binding energy criteria (e. g., E <= -10 kJ/mol), while some of them still have a binding energy that exceeds the energy criterion, indicating that the complicated quantum effects in H bonding can only be described by the three geometric parameters to a certain extent. (C) 2012 American Institute of Physics. [http://dx.doi.org/10.1063/1.4705371]
引用
收藏
页数:7
相关论文
共 50 条
  • [41] Hydrogen bond dynamics and vibrational spectroscopy of aqueous system: An ab initio molecular dynamics study
    Karmakar, Anwesa
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2012, 244
  • [42] Ab initio molecular dynamics simulation of liquid hydrogen fluoride
    Rothlisberger, U
    Parrinello, M
    JOURNAL OF CHEMICAL PHYSICS, 1997, 106 (11): : 4658 - 4664
  • [43] Ab initio molecular dynamics simulation of hydrogen diffusion in α-iron
    Sanchez, J.
    Fullea, J.
    Andrade, M. C.
    de Andres, P. L.
    PHYSICAL REVIEW B, 2010, 81 (13):
  • [44] Ab Initio Molecular Dynamics Study of Dissociation of Water under an Electric Field
    Saitta, A. Marco
    Saija, Franz
    Giaquinta, Paolo V.
    PHYSICAL REVIEW LETTERS, 2012, 108 (20)
  • [45] Ab initio molecular dynamics study of dissociation of water under an electric field
    Saitta, Antonino Marco
    Saija, Franz
    Giaquinta, Paolo V.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2012, 244
  • [46] An Ab Initio Molecular Dynamics Study on the Hydrolysis of the Po(IV) Aquaion in Water
    Ayala, Regla
    Spezia, Riccardo
    Vuilleumier, Rodolphe
    Manuel Martinez, Jose
    Pappalardo, Rafael R.
    Sanchez Marcos, Enrique
    JOURNAL OF PHYSICAL CHEMISTRY B, 2010, 114 (40): : 12866 - 12874
  • [47] Solvation Shell of the Nitrite Ion in Water: An Ab Initio Molecular Dynamics Study
    Yadav, Sushma
    Chandra, Amalendu
    JOURNAL OF PHYSICAL CHEMISTRY B, 2020, 124 (33): : 7194 - 7204
  • [48] Controlling the shape and flexibility of arylamides: A combined ab initio, ab initio molecular dynamics, and classical molecular dynamics study
    Pophristic, V
    Vemparala, S
    Ivanov, I
    Liu, ZW
    Klein, ML
    DeGrado, WF
    JOURNAL OF PHYSICAL CHEMISTRY B, 2006, 110 (08): : 3517 - 3526
  • [49] AB-INITIO STUDIES OF HYDROGEN-BONDS - THE WATER DIMER PARADIGM
    SCHEINER, S
    ANNUAL REVIEW OF PHYSICAL CHEMISTRY, 1994, 45 : 23 - 56
  • [50] Hydrogen diffusion near saturation solubility in α-U: An ab initio molecular dynamics study
    Lin, Jiani
    Guan, Pengfei
    COMPUTATIONAL MATERIALS SCIENCE, 2024, 244