Synergistic regulation mechanism of iperoxo and LY2119620 for muscarinic acetylcholine M2 receptor

被引:4
|
作者
Li, Quan [1 ]
Chen, Hai-Feng [1 ,2 ]
机构
[1] Shanghai Jiao Tong Univ, Coll Life Sci & Biotechnol, Natl Expt Teaching Ctr Life Sci & Biotechnol, Dept Bioinformat & Biostat,State Key Lab Microbia, Shanghai 200240, Peoples R China
[2] Shanghai Ctr Bioinformat Technol, Shanghai 200235, Peoples R China
基金
中国国家自然科学基金;
关键词
DYNAMICS FLUCTUATION NETWORK; POISSON-BOLTZMANN SOLVERS; PROTEIN-COUPLED RECEPTOR; ALLOSTERIC MECHANISM; FORCE-FIELD; ACTIVATION; BINDING; RECOGNITION; MODULATORS; COMPLEX;
D O I
10.1039/c8ra01545g
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Muscarinic acetylcholine receptors are GPCRs that regulate the activity of a diverse array of central and peripheral functions in the human body, including the parasympathetic actions of acetylcholine. The M2 muscarinic receptor subtype plays a key role in modulating cardiac function and many important central processes. The orthosteric agonist and allosteric modulator can bind the pocket of M2. However, the detailed relationship between orthosteric agonist and allosteric modulator of M2 is still unclear. In this study, we intend to elucidate the residue-level regulation mechanism and pathway via a combined approach of dynamical correlation network and molecular dynamics simulation. Specifically computational residue-level fluctuation correlation data was analyzed to reveal detailed dynamics signatures in the regulation process. A hypothesis of synergistic regulation is proposed to reveal the cooperation affection between the orthosteric agonist and allosteric modulator, which is subsequently validated by perturbation and mutation analyses. Two possible synergistic regulation pathways of 2CU-I178-Y403-W400-F396-L114-Y440-Nb9 and IXO-V111-F396-L114-Y440-Nb9 were identified by the shortest path algorithm and were confirmed by the mutation of junction node. Furthermore, the efficiency of information transfer of bound M2 is significant higher than any single binding system. Our study shows that targeting the synergistic regulation pathways may better regulate the calcium channel of M2. The knowledge gained in this study may help develop drugs for diseases of the central nervous system and metabolic disorders.
引用
收藏
页码:13067 / 13074
页数:8
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