Tn7382, a novel composite transposon harboring blaNDM-1 and aphA6 in Acinetobacter baumannii

被引:10
作者
Hamed, Samira M. [1 ]
Hussein, Amira F. A. [2 ]
Al-Agamy, Mohamed H. [3 ,4 ]
Radwan, Hesham H. [3 ]
Zafer, Mai M. [5 ]
机构
[1] October Univ Modern Sci & Arts MSA, Fac Pharm, Dept Microbiol & Immunol, Giza, Egypt
[2] Cairo Univ, Fac Med, Dept Clin & Chem Pathol, Cairo, Egypt
[3] King Saud Univ, Coll Pharm, Dept Pharmaceut, Riyadh, Saudi Arabia
[4] Al Azhar Univ, Fac Pharm, Dept Microbiol & Immunol, Cairo, Egypt
[5] Ahram Canadian Univ, Fac Pharm, Dept Microbiol & Immunol, Cairo, Egypt
关键词
Acinetobacter baumannii; Whole genome sequencing; WGS; Transposon; Tn; 7382; bla(NDM-1); aphA6; ISAba14; Carbapenem resistance; Amikacin resistance; Homologous recombination; RESISTANCE; CLONE;
D O I
10.1016/j.jgar.2022.08.001
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
Objectives: Co-transfer of carbapenem and amikacin resistance might contribute to the evolution of ex-tensively drug resistant (XDR) Acinetobacter baumannii. The current study used bioinformatic tools and an in silico approach to investigate the potential mobility of a novel composite transposon co-harboring blaNDM-1 and aphA6. Methods: The transposon, named here Tn7382, was recently identified in the chromosomes of two XDR A. baumannii isolates (M02 and M11) from Egypt. The draft genomes of M02 and M11 were generated by Illumina sequencing. Nucleotide homology of Tn7382 and flanking regions was analyzed using the Basic Local Alignment Search Tool. Results: Tn7382 is derived from Tn125 and encompasses seven open reading frames [aphA6, ISAba125 transposase-coding gene , blaNDM-1, ble, iso, tat, cutA] enclosed by two direct copies of ISAba14. While de-scribed for the first time, Tn7382 was found in the chromosomes of five A. baumannii strains deposited in the NCBI database. Using the Artemis Comparison Tool, the potential mobility of Tn7382 was demon-strated in silico by comparative genomic analysis of two A. baumannii strains (TP1 and TP2) retrieved from the NCBI database. The transposon was acquired by TP2 at the same location as an ISAba14 element in the ancestral variant TP1 isolated from the same patient in the USA 11 days earlier .Conclusions: Here, we present the characteristics of Tn7382, a composite transposon flanked by ISAba14 and harboring the aphA6 and blaNDM-1 resistance genes. In silico analysis inferred the potential mobility of Tn7382, but experimental validation is still required. (C) 2022 The Author(s). Published by Elsevier Ltd on behalf of International Society for Antimicrobial Chemotherapy.
引用
收藏
页码:414 / 417
页数:4
相关论文
共 15 条
[1]   Variants of AbGRI3 carrying the armA gene in extensively antibiotic-resistant Acinetobacter baumannii from Singapore [J].
Blackwell, Grace A. ;
Holt, Kathryn E. ;
Bentley, Stephen D. ;
Hsu, Li Yang ;
Hall, Ruth M. .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2017, 72 (04) :1031-1039
[2]   Dissemination of New Delhi metallo-ß-lactamase-1-producing Acinetobacter baumannii in Europe [J].
Bonnin, R. A. ;
Poirel, L. ;
Naas, T. ;
Pirs, M. ;
Seme, K. ;
Schrenzel, J. ;
Nordmann, P. .
CLINICAL MICROBIOLOGY AND INFECTION, 2012, 18 (09) :E362-E365
[3]   Multidrug-Resistant Acinetobacter baumannii Clone, France [J].
Bonnin, Remy A. ;
Cuzon, Gaelle ;
Poirel, Laurent ;
Nordmann, Patrice .
EMERGING INFECTIOUS DISEASES, 2013, 19 (05) :822-823
[4]   A novel and hybrid composite transposon at the origin of acquisition of blaRTG-5 in Acinetobacter baumannii [J].
Bonnin, Remy A. ;
Poirel, Laurent ;
Nordmann, Patrice .
INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 2012, 40 (03) :257-259
[5]   TRANSFERABLE AMIKACIN RESISTANCE IN ACINETOBACTER SPP DUE TO A NEW TYPE OF 3'-AMINOGLYCOSIDE PHOSPHOTRANSFERASE [J].
LAMBERT, T ;
GERBAUD, G ;
COURVALIN, P .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 1988, 32 (01) :15-19
[6]  
Muller C, 2019, 29 EUR C CLIN MICR I
[7]   Aminoglycoside resistance in multiply antibiotic-resistant Acinetobacter baumannii belonging to global clone 2 from Australian hospitals [J].
Nigro, Steven J. ;
Post, Virginia ;
Hall, Ruth M. .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2011, 66 (07) :1504-1509
[8]   Carbapenem-resistant Acinetobacter baumannii: in pursuit of an effective treatment [J].
Piperaki, E. -T. ;
Tzouvelekis, L. S. ;
Miriagou, V. ;
Daikos, G. L. .
CLINICAL MICROBIOLOGY AND INFECTION, 2019, 25 (08) :951-957
[9]   New Delhi metallo-beta-lactamase (NDM-1): towards a new pandemia? [J].
Rolain, J. M. ;
Parola, P. ;
Cornaglia, G. .
CLINICAL MICROBIOLOGY AND INFECTION, 2010, 16 (12) :1699-1701
[10]   Genomic mapping of ST85 blaNDM-1 and blaOXA-94 producing Acinetobacter baumannii isolates from Syrian Civil War Victims [J].
Salloum, Tamara ;
Tannous, Elie ;
Alousi, Sahar ;
Arabaghian, Harout ;
Rafei, Rayane ;
Hamze, Monzer ;
Tokajian, Sima .
INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES, 2018, 74 :100-108