Structure of the polypeptide crotamine from the Brazilian rattlesnake Crotalus durissus terrificus

被引:41
作者
Coronado, Monika A. [1 ,2 ]
Gabdulkhakov, Azat [3 ]
Georgieva, Dessislava [2 ]
Sankaran, Banumathi [4 ]
Murakami, Mario T. [5 ]
Arni, Raghuvir K. [1 ]
Betzel, Christian [2 ]
机构
[1] Sao Paulo State Univ, UNESP IBILCE, Dept Phys, Multi User Ctr Biomol Innovat, BR-15054000 Sao Jose Do Rio Preto, SP, Brazil
[2] Univ Hamburg, Inst Biochem & Mol Biol, D-20146 Hamburg, Germany
[3] RAS, Inst Prot Res, Pushchino 142290, Moscow Region, Russia
[4] Lawrence Berkeley Natl Lab, Phys Biosci Div, Berkeley, CA 94702 USA
[5] Natl Ctr Energy & Mat Res, Biosci Natl Lab, BR-13083970 Campinas, SP, Brazil
来源
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY | 2013年 / 69卷
基金
巴西圣保罗研究基金会; 美国国家卫生研究院;
关键词
ANTIMICROBIAL PEPTIDES; INSECT DEFENSIN; VENOM; ANTIBACTERIAL; MYOTOXIN; DISTINCT; TOXIN; MODEL;
D O I
10.1107/S0907444913018003
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The crystal structure of the myotoxic, cell-penetrating, basic polypeptide crotamine isolated from the venom of Crotalus durissus terrificus has been determined by single-wavelength anomalous dispersion techniques and refined at 1.7 angstrom resolution. The structure reveals distinct cationic and hydrophobic surface regions that are located on opposite sides of the molecule. This surface-charge distribution indicates its possible mode of interaction with negatively charged phospholipids and other molecular targets to account for its diverse pharmacological activities. Although the sequence identity between crotamine and human beta-defensins is low, the three-dimensional structures of these functionally related peptides are similar. Since crotamine is a leading member of a large family of myotoxic peptides, its structure will provide a basis for the design of novel cell-penetrating molecules.
引用
收藏
页码:1958 / 1964
页数:7
相关论文
共 40 条
[1]   PHENIX: a comprehensive Python']Python-based system for macromolecular structure solution [J].
Adams, Paul D. ;
Afonine, Pavel V. ;
Bunkoczi, Gabor ;
Chen, Vincent B. ;
Davis, Ian W. ;
Echols, Nathaniel ;
Headd, Jeffrey J. ;
Hung, Li-Wei ;
Kapral, Gary J. ;
Grosse-Kunstleve, Ralf W. ;
McCoy, Airlie J. ;
Moriarty, Nigel W. ;
Oeffner, Robert ;
Read, Randy J. ;
Richardson, David C. ;
Richardson, Jane S. ;
Terwilliger, Thomas C. ;
Zwart, Peter H. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 :213-221
[2]   iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM [J].
Battye, T. Geoff G. ;
Kontogiannis, Luke ;
Johnson, Owen ;
Powell, Harold R. ;
Leslie, Andrew G. W. .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2011, 67 :271-281
[3]   Effects of 60Co gamma radiation on crotamine [J].
Boni-Mitake, M ;
Costa, H ;
Spencer, PJ ;
Vassilieff, VS ;
Rogero, JR .
BRAZILIAN JOURNAL OF MEDICAL AND BIOLOGICAL RESEARCH, 2001, 34 (12) :1531-1538
[4]   ANALYSIS OF SIDE-CHAIN ORGANIZATION ON A REFINED MODEL OF CHARYBDOTOXIN - STRUCTURAL AND FUNCTIONAL IMPLICATIONS [J].
BONTEMS, F ;
GILQUIN, B ;
ROUMESTAND, C ;
MENEZ, A ;
TOMA, F .
BIOCHEMISTRY, 1992, 31 (34) :7756-7764
[5]   Plant defensins-Prospects for the biological functions and biotechnological properties [J].
Carvalho, Andre de Oliveira ;
Gomes, Valdirene Moreira .
PEPTIDES, 2009, 30 (05) :1007-1020
[6]  
COCIANCICH S, 1993, J BIOL CHEM, V268, P19239
[7]   REFINED 3-DIMENSIONAL SOLUTION STRUCTURE OF INSECT DEFENSIN-A [J].
CORNET, B ;
BONMATIN, JM ;
HETRU, C ;
HOFFMANN, JA ;
PTAK, M ;
VOVELLE, F .
STRUCTURE, 1995, 3 (05) :435-448
[8]   Purification, crystallization and preliminary X-ray diffraction analysis of crotamine, a myotoxic polypeptide from the Brazilian snake Crotalus durissus terrificus [J].
Coronado, Monika A. ;
Georgieva, Dessislava ;
Buck, Friedrich ;
Gabdoulkhakov, Azat H. ;
Ullah, Anwar ;
Spencer, Patrick J. ;
Arni, Raghuvir K. ;
Betzel, Christian .
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2012, 68 :1052-1054
[9]  
Dimarcq JL, 1998, BIOPOLYMERS, V47, P465, DOI 10.1002/(SICI)1097-0282(1998)47:6<465::AID-BIP5>3.0.CO
[10]  
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