Artificial Neural Network Genetic Algorithm As Powerful Tool to Predict and Optimize In vitro Proliferation Mineral Medium for G x N15 Rootstock

被引:53
作者
Arab, Mohammad M. [1 ,2 ]
Yadollahi, Abbas [1 ]
Shojaeiyan, Abdolali [1 ]
Ahmadi, Hamed [3 ]
机构
[1] Tarbiat Modares Univ, Dept Hort Sci, Fac Agr, Tehran, Iran
[2] Univ Tehran, Dept Hort Sci, Coll Abooraihan, Tehran, Iran
[3] Tarbiat Modares Univ, Dept Poultry Sci, Fac Agr, Tehran, Iran
关键词
artificial neural network (ANN); genetic algorithm (GA); G x N15 rootstock; ion macronutrients; proliferation; Prunus micropropagation; ADVENTITIOUS SHOOT REGENERATION; RESPONSE-SURFACE METHODOLOGY; TISSUE-CULTURE MEDIUM; NEUROFUZZY LOGIC; INORGANIC NITROGEN; GROWTH; PLANT; MICROPROPAGATION; L; MULTIPLICATION;
D O I
10.3389/fpls.2016.01526
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
One of the major obstacles to the micropropagation of Prunus rootstocks has, up until now, been the lack of a suitable tissue culture medium. Therefore, reformulation of culture media or modification of the mineral content might be a breakthrough to improve in vitro multiplication of G x N15 (garnem). We found artificial neural network in combination of genetic algorithm (ANN-GA) as a very precise and powerful modeling system for optimizing the culture medium, So that modeling the effects of MS mineral salts (NH4+, NO3-, PO42-, Ca2+, K+, SO42-, Mg2+, and Cl-) on in vitro multiplication parameters (the number of microshoots per explant, average length of microshoots, weight of calluses derived from the base of stern explants, and quality index of plantlets) of G x N15. Showed high R-2 correlation values of 87, 91, 87, and 74 between observed and predicted values were found for these four growth parameters, respectively. According to the ANN-GA results, among the input variables, NH4+ and NO3- had the highest values of VSR in data set for the parameters studied. The ANN-GA showed that the best proliferation rate was obtained from medium containing (mM) 27.5 NO3-, 14 NH4+, 5 Ca2+, 25.9 K+ 0.7 Mg2+, 1.1 PO42-, 4.7 SO42-, and 0.96 Cl-. The performance of the medium optimized by ANN-GA, denoted as YAS (Yadollahi, Arab and Shojaeiyan), was compared to that of standard growth media for all Prunus rootstock, including the Murashige and Skoog (MS) medium, (specific media) EM, Quoirin and Lepoivre (QL) medium, and woody plant medium PPM) Prunus. With respect to shoot length, shoot number per cultured explant and productivity (number of microshoots x length of microshoots), YAS was found to be superior to other media for in vitro multiplication of G x N15 rootstocks. In addition, our results indicated that by using ANN-GA, we were able to determine a suitable culture medium formulation to achieve the best in vitro productivity.
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页数:16
相关论文
共 65 条
[1]   Spent medium analysis for liquid culture micropropagation of Hemerocallis on Murashige and Skoog medium [J].
Adelberg, Jeffrey W. ;
Delgado, Maria P. ;
Tomkins, Jeffery T. .
IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-PLANT, 2010, 46 (01) :95-107
[2]   Response surface and neural network models for performance of broiler chicks fed diets varying in digestible protein and critical amino acids from 11 to 17 days of age [J].
Ahmadi, H. ;
Golian, A. .
POULTRY SCIENCE, 2011, 90 (09) :2085-2096
[3]   The integration of broiler chicken threonine responses data into neural network models [J].
Ahmadi, H. ;
Golian, A. .
POULTRY SCIENCE, 2010, 89 (11) :2535-2541
[4]   Growth analysis of chickens fed diets varying in the percentage of metabolizable energy provided by protein, fat, and carbohydrate through artificial neural network [J].
Ahmadi, H. ;
Golian, A. .
POULTRY SCIENCE, 2010, 89 (01) :173-179
[5]   Design of tissue culture media for efficient Prunus rootstock micropropagation using artificial intelligence models [J].
Alanagh, Esmaeil Nezami ;
Garoosi, Ghasem-ali ;
Haddad, Raheem ;
Maleki, Sara ;
Landin, Mariana ;
Pablo Gallego, Pedro .
PLANT CELL TISSUE AND ORGAN CULTURE, 2014, 117 (03) :349-359
[6]   In vitro culture establishment and multiplication of the Prunus rootstock 'Adesoto 101' (P. insititia L.) as affected by the type of propagation of the donor plant and by the culture medium composition [J].
Andreu, P ;
Marín, JA .
SCIENTIA HORTICULTURAE, 2005, 106 (02) :258-267
[7]  
[Anonymous], EUR J SCI RES
[8]  
Arab Mohammad M., 2014, Journal of Genetic Engineering and Biotechnology, V12, P103, DOI 10.1016/j.jgeb.2014.10.002
[9]  
Ashrafi EN, 2010, J FOOD AGRIC ENVIRON, V8, P325
[10]   Rootstock breeding for stone fruits [J].
Beckman, TG ;
Lang, GA .
GENETICS AND BREEDING OF TREE FRUITS AND NUTS, 2003, (622) :531-551