Plasmonic-Nanopore Biosensors for Superior Single-Molecule Detection

被引:144
作者
Spitzberg, Joshua D. [1 ]
Zrehen, Adam [1 ]
van Kooten, Xander F. [1 ]
Meller, Amit [1 ,2 ]
机构
[1] Technion IIT, Dept Biomed Engn, IL-32000 Haifa, Israel
[2] Boston Univ, Dept Biomed Engn, Boston, MA 02215 USA
基金
以色列科学基金会;
关键词
biosensors; DNA sequencing; electro-optical sensing; light enhancement; nanopores; plasmonics; single-molecule sensing; SOLID-STATE NANOPORES; ELECTRON-BEAM LITHOGRAPHY; ENHANCED RAMAN-SCATTERING; INDUCED IONIC NOISE; FLUORESCENCE ENHANCEMENT; DNA TRANSLOCATION; OPTICAL-DETECTION; RAPID FABRICATION; FOCUSED ION; SURFACE;
D O I
10.1002/adma.201900422
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Plasmonic and nanopore sensors have separately received much attention for achieving single-molecule precision. A plasmonic "hotspot" confines and enhances optical excitation at the nanometer length scale sufficient to optically detect surface-analyte interactions. A nanopore biosensor actively funnels and threads analytes through a molecular-scale aperture, wherein they are interrogated by electrical or optical means. Recently, solid-state plasmonic and nanopore structures have been integrated within monolithic devices that address fundamental challenges in each of the individual sensing methods and offer complimentary improvements in overall single-molecule sensitivity, detection rates, dwell time and scalability. Here, the physical phenomena and sensing principles of plasmonic and nanopore sensing are summarized to highlight the novel complementarity in dovetailing these techniques for vastly improved single-molecule sensing. A literature review of recent plasmonic nanopore devices is then presented to delineate methods for solid-state fabrication of a range of hybrid device formats, evaluate the progress and challenges in the detection of unlabeled and labeled analyte, and assess the impact and utility of localized plasmonic heating. Finally, future directions and applications inspired by the present state of the art are discussed.
引用
收藏
页数:18
相关论文
共 147 条
[1]   Microsecond time-scale discrimination among polycytidylic acid, polyadenylic acid, and polyuridylic acid as homopolymers or as segments within single RNA molecules [J].
Akeson, M ;
Branton, D ;
Kasianowicz, JJ ;
Brandin, E ;
Deamer, DW .
BIOPHYSICAL JOURNAL, 1999, 77 (06) :3227-3233
[2]   Probing Solid-State Nanopores with Light for the Detection of Unlabeled Analytes [J].
Anderson, Brett N. ;
Assad, Ossama N. ;
Gilboa, Tal ;
Squires, Allison H. ;
Bar, Daniel ;
Meller, Amit .
ACS NANO, 2014, 8 (11) :11836-11845
[3]   Enhancement and quenching of single-molecule fluorescence [J].
Anger, P ;
Bharadwaj, P ;
Novotny, L .
PHYSICAL REVIEW LETTERS, 2006, 96 (11)
[4]   Biosensing with plasmonic nanosensors [J].
Anker, Jeffrey N. ;
Hall, W. Paige ;
Lyandres, Olga ;
Shah, Nilam C. ;
Zhao, Jing ;
Van Duyne, Richard P. .
NATURE MATERIALS, 2008, 7 (06) :442-453
[5]   In Situ Nanopore Fabrication and Single-Molecule Sensing with Microscale Liquid Contacts [J].
Arcadia, Christopher E. ;
Reyes, Carlos C. ;
Rosenstein, Jacob K. .
ACS NANO, 2017, 11 (05) :4907-4915
[6]   Light-Enhancing Plasmonic-Nanopore Biosensor for Superior Single-Molecule Detection [J].
Assad, Ossama N. ;
Gilboa, Tal ;
Spitzberg, Joshua ;
Juhasz, Matyas ;
Weinhold, Elmar ;
Meller, Amit .
ADVANCED MATERIALS, 2017, 29 (09)
[7]   Two Color DNA Barcode Detection in Photoluminescence Suppressed Silicon Nitride Nanopores [J].
Assad, Ossama N. ;
Di Fiori, Nicolas ;
Squires, Allison H. ;
Meller, Amit .
NANO LETTERS, 2015, 15 (01) :745-752
[8]   Zero-mode waveguide detection of DNA translocation through FIB-organised arrays of engineered nanopores [J].
Auger, T. ;
Bourhis, E. ;
Donnez, J. ;
Durnez, A. ;
Di Meglio, J. M. ;
Auvray, L. ;
Montel, F. ;
Yates, J. ;
Gierak, J. .
MICROELECTRONIC ENGINEERING, 2018, 187 :90-94
[9]   Nanopore Sequencing: From Imagination to Reality [J].
Bayley, Hagan .
CLINICAL CHEMISTRY, 2015, 61 (01) :25-31
[10]   Plasmonic Nanopores for Trapping, Controlling Displacement, and Sequencing of DNA [J].
Belkin, Maxim ;
Chao, Shu-Han ;
Jonsson, Magnus P. ;
Dekker, Cees ;
Aksimentiev, Aleksei .
ACS NANO, 2015, 9 (11) :10598-10611