Analysis of receptor-ligand binding by photoaffinity cross-linking

被引:5
作者
Xu Bin [1 ]
Wu Ling
机构
[1] Virginia Tech, Dept Biochem, Blacksburg, VA 24061 USA
关键词
photoaffinity cross-linking; receptor-ligand interaction; photoscanning; bifunctional photo-probe; biosynthetic photo-probe; novel receptor discovery; DIABETES-ASSOCIATED MUTATIONS; PROTEIN-PROTEIN INTERACTIONS; SITE-SPECIFIC INCORPORATION; NONCANONICAL AMINO-ACIDS; INSULIN-RECEPTOR; ESCHERICHIA-COLI; GENETIC-CODE; MAMMALIAN-CELLS; INTEGRIN ALPHA(V)BETA(3); COUPLED-RECEPTORS;
D O I
10.1007/s11426-013-5045-z
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Photoaffinity cross-linking is a fast developing technology for biomolecular interactions, including receptor-ligand binding. The chemical mechanisms of the most commonly used photoactivatable probes and their respective photochemistry are summarized. This review focuses on the expanding utilities of this technology as a result of recent advances in the (i) identification of receptor contact sites, (ii) monitoring ligand-induced receptor conformational changes, (iii) identification of global binding surfaces, (iv) binding mode analysis using bifunctional photo-probes, (v) application of biosynthetic photo-probes, and (vi) examples of novel target discovery using this technology. Limitations and future potential of this approach are also discussed.
引用
收藏
页码:232 / 242
页数:11
相关论文
共 50 条
[1]   An engineered aryl azide ligase for site-specific mapping of protein-protein interactions through photo-cross-linking [J].
Baruah, Hemanta ;
Puthenveetil, SuJiet ;
Choi, Yoon-Aa ;
Shah, Samit ;
Ting, Alice Y. .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2008, 47 (37) :7018-7021
[2]  
Bayley H., 1983, Photogenerated reagents in biochemistry and molecular biology
[3]   Fluorescence visualization of newly synthesized proteins in mammalian cells [J].
Beatty, Kimberly E. ;
Liu, Julie C. ;
Xie, Fang ;
Dieterich, Daniela C. ;
Schuman, Erin M. ;
Wang, Qian ;
Tirrell, David A. .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2006, 45 (44) :7364-7367
[4]   Mapping the integrin αvβ3-ligand interface by photoaffinity cross-linking [J].
Bitan, G ;
Scheibler, L ;
Greenberg, Z ;
Rosenblatt, M ;
Chorev, M .
BIOCHEMISTRY, 1999, 38 (11) :3414-3420
[5]   Ligandi-integrin αvβ3 interaction determined by photoaffinity cross-linking:: A challenge to the prevailing model [J].
Bitan, G ;
Scheibler, L ;
Mierke, DF ;
Rosenblatt, M ;
Chorev, M .
BIOCHEMISTRY, 2000, 39 (36) :11014-11023
[6]   The positions of TFIIF and TFIIE in the RNA polymerase II transcription preinitiation complex [J].
Chen, Hung-Ta ;
Warfield, Linda ;
Hahn, Steven .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2007, 14 (08) :696-703
[7]   Addition of a photocrosslinking amino acid to the genetic code of Escherichia coli [J].
Chin, JW ;
Martin, AB ;
King, DS ;
Wang, L ;
Schultz, PG .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (17) :11020-11024
[8]   Addition of p-azido-L-phenylaianine to the genetic code of Escherichia coli [J].
Chin, JW ;
Santoro, SW ;
Martin, AB ;
King, DS ;
Wang, L ;
Schultz, PG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (31) :9026-9027
[9]   Photo-Cross-Linkers Incorporated into G-Protein-Coupled Receptors in Mammalian Cells: A Ligand Comparison [J].
Coin, Irene ;
Perrin, Marilyn H. ;
Vale, Wylie W. ;
Wang, Lei .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2011, 50 (35) :8077-8081
[10]   BENZOPHENONE PHOTOPHORES IN BIOCHEMISTRY [J].
DORMAN, G ;
PRESTWICH, GD .
BIOCHEMISTRY, 1994, 33 (19) :5661-5673