Draft Genome Sequence of the Wood-Staining Ascomycete Chlorociboria aeruginascens DSM 107184

被引:4
作者
Buettner, Enrico [1 ]
Liers, Christiane [1 ]
Gebauer, Anna Maria [1 ]
Collemare, Jerome [2 ]
Navarro-Munoz, Jorge Carlos [2 ]
Hofrichter, Martin [1 ]
Kellner, Harald [1 ]
机构
[1] Tech Univ Dresden, Int Inst Zittau, Dept Bio & Environm Sci, Zittau, Germany
[2] Westerdijk Fungal Biodivers Inst, Utrecht, Netherlands
来源
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2019年 / 8卷 / 17期
基金
欧盟地平线“2020”;
关键词
BLUE-GREEN PIGMENT; FUNGUS CHLOROCIBORIA; PREDICTION; XYLINDEIN;
D O I
10.1128/MRA.00249-19
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Chlorociboria aeruginascens DSM 107184 is a wood-decomposing ascomycetous fungus known to produce the bluish-green dimeric naphthoquinone derivate xylindein. Here, we present the first draft genome sequence, which contains 588 contigs with a total length of 33.1 Mb. Altogether, 8,648 protein-coding genes were predicted.
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页数:3
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共 15 条
  • [1] THE USE OF GREEN-STAINED WOOD CAUSED BY THE FUNGUS CHLOROCIBORIA IN INTARSIA MASTERPIECES FROM THE 15TH-CENTURY
    BLANCHETTE, RA
    WILMERING, AM
    BAUMEISTER, M
    [J]. HOLZFORSCHUNG, 1992, 46 (03) : 225 - 232
  • [2] antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification
    Blin, Kai
    Wolf, Thomas
    Chevrette, Marc G.
    Lu, Xiaowen
    Schwalen, Christopher J.
    Kautsar, Satria A.
    Duran, Hernando G. Suarez
    Santos, Emmanuel L. C. de los
    Kim, Hyun Uk
    Nave, Mariana
    Dickschat, Jeroen S.
    Mitchell, Douglas A.
    Shelest, Ekaterina
    Breitling, Rainer
    Takano, Eriko
    Lee, Sang Yup
    Weber, Tilmann
    Medema, Marnix H.
    [J]. NUCLEIC ACIDS RESEARCH, 2017, 45 (W1) : W36 - W41
  • [3] Chevreux B., 1999, Proceedings of the German Conference on Bioinformatics (GCB), V99, P45, DOI DOI 10.1.1.23/7465
  • [4] DENNIS R.W.G., 1956, MYCOLOGICAL PAPERS, V62
  • [5] Investigations towards the synthesis of xylindein, a blue-green pigment from the fungus Chlorociboria aeruginosa
    Donner, Christopher D.
    Cuzzupe, Anthony N.
    Falzon, Cheryl L.
    Gill, Melvyn
    [J]. TETRAHEDRON, 2012, 68 (13) : 2799 - 2805
  • [6] QUAST: quality assessment tool for genome assemblies
    Gurevich, Alexey
    Saveliev, Vladislav
    Vyahhi, Nikolay
    Tesler, Glenn
    [J]. BIOINFORMATICS, 2013, 29 (08) : 1072 - 1075
  • [7] Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
    Kearse, Matthew
    Moir, Richard
    Wilson, Amy
    Stones-Havas, Steven
    Cheung, Matthew
    Sturrock, Shane
    Buxton, Simon
    Cooper, Alex
    Markowitz, Sidney
    Duran, Chris
    Thierer, Tobias
    Ashton, Bruce
    Meintjes, Peter
    Drummond, Alexei
    [J]. BIOINFORMATICS, 2012, 28 (12) : 1647 - 1649
  • [8] Stimulating growth and xylindein production of Chlorociboria aeruginascens in agar-based systems
    Robinson, Sara C.
    Tudor, Daniela
    Snider, Hilary
    Cooper, Paul A.
    [J]. AMB EXPRESS, 2012, 2 : 1 - 7
  • [9] Wood species affects laboratory colonization rates of Chlorociboria sp.
    Robinson, Sara C.
    Laks, Peter E.
    [J]. INTERNATIONAL BIODETERIORATION & BIODEGRADATION, 2010, 64 (04) : 305 - 308
  • [10] Absolute configuration and tautomeric structure of xylindein, a blue-green pigment of Chlorociboria species
    Saikawa, Y
    Watanabe, T
    Hashimoto, K
    Nakata, M
    [J]. PHYTOCHEMISTRY, 2000, 55 (03) : 237 - 240