ProteomeCommons.org JAF: reference information and tools for proteomics

被引：10

作者：

Falkner, JA ^{[1
]}

Falkner, JW ^{[1
]}

Andrews, PC ^{[1
]}

机构：

[1] Univ Michigan, Dept Biol Chem, Ann Arbor, MI 48104 USA

来源：

BIOINFORMATICS | 2006年 / 22卷 / 05期

关键词：

D O I：

10.1093/bioinformatics/btk015

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Analysis of proteomics data, specifically mass spectrometry data, commonly relies on libraries of known information such as atomic masses, known stable isotopes, atomic compositions of amino acids, observed modifications of known amino acids and ion masses that directly correspond to known amino acid sequences. The Java Analysis Framework (JAF) for proteomics provides a freely usable, open-source library of Java code that abstracts all of the aforementioned data, enabling more rapid development of proteomics tools. The JAF also includes several user tools that can be run directly from a web browser. Availability: The current version and an archive of all older versions of the Java Analysis Framework for Proteomics is freely available, including complete source-code, at http://www.proteomecommons.org/current/511/ Contact: jfalkner@umich.edu.

引用

页码：632 / 633

页数：2

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