A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia Complex

被引:227
作者
Manamgoda, Dimuthu S. [1 ,2 ,3 ]
Cai, Lei [3 ]
McKenzie, Eric H. C. [4 ]
Crous, Pedro W. [5 ]
Madrid, Hugo [5 ]
Chukeatirote, Ekachai [1 ,2 ]
Shivas, Roger G. [6 ]
Tan, Yu Pei [6 ]
Hyde, Kevin D. [1 ,2 ]
机构
[1] Mae Fah Luang Univ, Inst Excellence Fungal Res, Chiang Rai 57100, Thailand
[2] Mae Fah Luang Univ, Sch Sci, Chiang Rai 57100, Thailand
[3] Chinese Acad Sci, State Key Lab Mycol, Inst Microbiol, Beijing 100190, Peoples R China
[4] Landcare Res, Auckland, New Zealand
[5] CBS KNAW Fungal Biodivers Ctr, NL-3584 CT Utrecht, Netherlands
[6] Plant Biosecur Sci, Dept Agr Fisheries & Forestry, Plant Pathol Herbarium BRIP, Brisbane, Qld 4001, Australia
关键词
Anamorph; Generic complex; Neotype; Nomenclature; Pathogens; Pseudocochliobolus; SPECIES CONCEPTS; HELMINTHOSPORIUM; MORPHOLOGY; SEQUENCES; ALIGNMENT; BIOLOGY; GENES; FUNGI; NAMES; GENUS;
D O I
10.1007/s13225-012-0189-2
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Three genera, Cochliobolus, Bipolaris and Curvularia form a complex that contains many plant pathogens, mostly on grasses (Poaceae) with a worldwide distribution. The taxonomy of this complex is confusing as frequent nomenclatural changes and refinements have occurred. There is no clear morphological boundary between the asexual genera Bipolaris and Curvularia, and some species show intermediate morphology. We investigated this complex based on a set of ex-type cultures and collections from northern Thailand. Combined gene analysis of rDNA ITS (internal transcribed spacer), GPDH (glyceraldehyde 3-phosphate dehydrogenase), LSU (large subunit) and EF1-alpha (translation elongation factor 1-alpha) shows that this generic complex divides into two groups. Bipolaris and Cochliobolus species clustered in Group 1 along with their type species, whereas Curvularia species (including species named as Bipolaris, Cochliobolus and Curvularia) clustered in Group 2, with its generic type. The nomenclatural conflict in this complex is resolved giving priority to the more commonly used established generic names Bipolaris and Curvularia. Modern descriptions of the genera Bipolaris and Curvularia are provided and species resolved in this study are transferred to one of these genera based on their phylogeny.
引用
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页码:131 / 144
页数:14
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