The Role of Initial Oligomers in Amyloid Fibril Formation by Human Stefin B

被引:12
|
作者
Taler-Vercic, Ajda [1 ,2 ]
Kirsipuu, Tiina [3 ]
Friedemann, Merlin [3 ]
Noormaegi, Andra [3 ]
Polajnar, Mira [1 ,2 ]
Smirnova, Julia [3 ]
Znidaric, Magda Tusek [4 ]
Zganec, Matjaz [1 ,5 ]
Skarabot, Miha [6 ]
Vilfan, Andrej [6 ]
Staniforth, Rosemary A. [7 ]
Palumaa, Peep [3 ]
Zerovnik, Eva [1 ,2 ]
机构
[1] Jozef Stefan Inst, Dept Biochem Mol & Struct Biol, Ljubljana 1000, Slovenia
[2] Jozef Stefans Int Postgrad Sch IPS, Ljubljana 1000, Slovenia
[3] Tallinn Univ Technol, Dept Gene Technol, EE-12618 Tallinn, Estonia
[4] Natl Inst Biol, Dept Biotechnol & Syst Biol, Ljubljana 1000, Slovenia
[5] Univ Ljubljana, Fac Math & Phys, Ljubljana 1000, Slovenia
[6] Jozef Stefan Inst, Dept Condensed Matter Phys, Ljubljana 1000, Slovenia
[7] Univ Sheffield, Dept Mol Biol & Biotechnol, Sheffield S10 2TN, S Yorkshire, England
关键词
human stefin B; cystatins; protein aggregation; prefibrillar oligomers; mechanism of amyloid fibril formation; ESI MS; SEC; lag phase; PROGRESSIVE MYOCLONUS EPILEPSY; IONIZATION MASS-SPECTROMETRY; CYSTATIN-B; MOLTEN-GLOBULE; IN-VITRO; CONFORMATIONAL HETEROGENEITY; PROTEIN INHIBITORS; ALZHEIMERS-DISEASE; PORE FORMATION; EPM1; MUTANTS;
D O I
10.3390/ijms140918362
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Oligomers are commonly observed intermediates at the initial stages of amyloid fibril formation. They are toxic to neurons and cause decrease in neural transmission and long-term potentiation. We describe an in vitro study of the initial steps in amyloid fibril formation by human stefin B, which proved to be a good model system. Due to relative stability of the initial oligomers of stefin B, electrospray ionization mass spectrometry (ESI MS) could be applied in addition to size exclusion chromatography (SEC). These two techniques enabled us to separate and detect distinguished oligomers from the monomers: dimers, trimers, tetramers, up to decamers. The amyloid fibril formation process was followed at different pH and temperatures, including such conditions where the process was slow enough to detect the initial oligomeric species at the very beginning of the lag phase and those at the end of the lag phase. Taking into account the results of the lower-order oligomers transformations early in the process, we were able to propose an improved model for the stefin B fibril formation.
引用
收藏
页码:18362 / 18384
页数:23
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