Targeted next generation sequencing is comparable with metagenomic next generation sequencing in adults with pneumonia for pathogenic microorganism detection

被引：85

作者：

Li, Shiying ^{[1
]}

Tong, Jin ^{[2
]}

Liu, Yi ^{[1
]}

Shen, Wei ^{[1
]}

Hu, Peng ^{[1
]}

机构：

[1] Chongqing Med Univ, Dept Infect Dis, Key Lab Mol Biol Infect Dis, Inst Viral Hepatitis,Minist Educ,Affiliated Hosp, 74 Linjiang Rd, Chongqing 400010, Peoples R China

[2] Chongqing Med Univ, Dept Resp Med, Affiliated Hosp 2, Chongqing, Peoples R China

来源：

JOURNAL OF INFECTION | 2022年 / 85卷 / 05期

关键词：

DIAGNOSIS;

D O I：

10.1016/j.jinf.2022.08.022

中图分类号：

R51 [传染病];

学科分类号：

100401 ;

摘要：

引用

页码：E127 / E129

页数：3

共 8 条

[1] Aetiology and clinical presentation of mild community-acquired bacterial pneumonia [J].

Beovic, B ;

Bonac, B ;

Kese, D ;

Avsic-Zupanc, T ;

Kreft, S ;

Lesnicar, G ;

Gorisek-Rebersek, J ;

Rezar, L ;

Letonja, S .

EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES, 2003, 22 (10) :584-591

[2]

Ivy MI, 2018, J CLIN MICROBIOL, V56, DOI [10.1128/JCM.00402-18, 10.1128/jcm.00402-18]

[3] Microbiological Diagnostic Performance of Metagenomic Next-generation Sequencing When Applied to Clinical Practic [J].

Miao, Qing ;

Ma, Yuyan ;

Wang, Qingqing ;

Pan, Jue ;

Zhang, Yao ;

Jin, Wenting ;

Yao, Yumeng ;

Su, Yi ;

Huang, Yingnan ;

Wang, Mengran ;

Li, Bing ;

Li, Huaying ;

Zhou, Chunmei ;

Li, Chun ;

Ye, Maosong ;

Xu, Xiaoling ;

Li, Yongjun ;

Hu, Bijie .

CLINICAL INFECTIOUS DISEASES, 2018, 67 :S231-S240

[4] Metagenomic next-generation sequencing for the diagnosis of suspected pneumonia in immunocompromised patients [J].

Peng, Jin-Min ;

Du, Bin ;

Qin, Han-Yu ;

Wang, Qian ;

Shi, Yan .

JOURNAL OF INFECTION, 2021, 82 (04) :22-27

[5] Impact of guideline-concordant microbiological testing on outcomes of pneumonia [J].

Uematsu, Hironori ;

Hashimoto, Hideki ;

Iwamoto, Tetsuya ;

Horiguchi, Hiromasa ;

Yasunaga, Hideo .

INTERNATIONAL JOURNAL FOR QUALITY IN HEALTH CARE, 2014, 26 (01) :100-107

[6] Comparison of hospitalwide surveillance and targeted intensive care unit surveillance of healthcare-associated infections [J].

Weber, David J. ;

Sickbert-Bennett, Emily E. ;

Brown, Vickie ;

Rutala, William A. .

INFECTION CONTROL AND HOSPITAL EPIDEMIOLOGY, 2007, 28 (12) :1361-1366

[7] Chronic Meningitis Investigated via Metagenomic Next-Generation Sequencing [J].

Wilson, Michael R. ;

O'Donovan, Brian D. ;

Gelfand, Jeffrey M. ;

Sample, Hannah A. ;

Chow, Felicia C. ;

Betjemann, John P. ;

Shah, Maulik P. ;

Richie, Megan B. ;

Gorman, Mark P. ;

Hajj-Ali, Rula A. ;

Calabrese, Leonard H. ;

Zorn, Kelsey C. ;

Chow, Eric D. ;

Greenlee, John E. ;

Blum, Jonathan H. ;

Green, Gary ;

Khan, Lillian M. ;

Banerji, Debarko ;

Langelier, Charles ;

Bryson-Cahn, Chloe ;

Harrington, Whitney ;

Lingappa, Jairam R. ;

Shanbhag, Niraj M. ;

Green, Ari J. ;

Brew, Bruce J. ;

Soldatos, Ariane ;

Strnad, Luke ;

Doernberg, Sarah B. ;

Jay, Cheryl A. ;

Douglas, Vanja ;

Josephson, S. Andrew ;

DeRisi, Joseph L. .

JAMA NEUROLOGY, 2018, 75 (08) :947-955

[8] Actionable Diagnosis of Neuroleptospirosis by Next-Generation Sequencing [J].

Wilson, Michael R. ;

Naccache, Samia N. ;

Samayoa, Erik ;

Biagtan, Mark ;

Bashir, Hiba ;

Yu, Guixia ;

Salamat, Shahriar M. ;

Somasekar, Sneha ;

Federman, Scot ;

Miller, Steve ;

Sokolic, Robert ;

Garabedian, Elizabeth ;

Candotti, Fabio ;

Buckley, Rebecca H. ;

Reed, Kurt D. ;

Meyer, Teresa L. ;

Seroogy, Christine M. ;

Galloway, Renee ;

Henderson, Sheryl L. ;

Gern, James E. ;

DeRisi, Joseph L. ;

Chiu, Charles Y. .

NEW ENGLAND JOURNAL OF MEDICINE, 2014, 370 (25) :2408-2417

← 1 →