Optical biopsy of head and neck cancer using hyperspectral imaging and convolutional neural networks

被引:53
作者
Hahoek, Martin [1 ,2 ,3 ]
Little, James, V [4 ]
Wang, Xu [5 ]
Chen, Amy Y. [6 ]
Fei, Baowei [1 ,7 ,8 ,9 ]
机构
[1] Univ Texas Dallas, Dept Bioengn, Richardson, TX 75083 USA
[2] Emory Univ, Atlanta, GA 30322 USA
[3] Georgia Inst Technol, Dept Biomed Engn, Atlanta, GA 30332 USA
[4] Emory Univ, Sch Med, Dept Pathol & Lab Med, Atlanta, GA 30322 USA
[5] Emory Univ, Sch Med, Dept Hematol & Med Oncol, Atlanta, GA USA
[6] Emory Univ, Sch Med, Dept Otolaryngol, Atlanta, GA USA
[7] Emory Univ, Sch Med, Dept Radiol & Imaging Sci, Atlanta, GA 30322 USA
[8] Univ Texas Southwestern Med Ctr Dallas, Adv Imaging Res Ctr, Dallas, TX 75390 USA
[9] Univ Texas Southwestern Med Ctr Dallas, Dept Radiol, Dallas, TX 75390 USA
基金
美国国家卫生研究院;
关键词
hyperspectral imaging; head and neck cancer; optical biopsy; convolutional neural network; deep learning; classification; squamous cell carcinoma; SQUAMOUS-CELL CARCINOMA; ADENOMATOID NODULES;
D O I
10.1117/1.JBO.24.3.036007
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
For patients undergoing surgical cancer resection of squamous cell carcinoma (SCCa), cancer-free surgical margins are essential for good prognosis. We developed a method to use hyperspectral imaging (HSI), a noncontact optical imaging modality, and convolutional neural networks (CNNs) to perform an optical biopsy of ex-vivo, surgical gross-tissue specimens, collected from 21 patients undergoing surgical cancer resection. Using a cross-validation paradigm with data from different patients, the CNN can distinguish SCCa from normal aerodigestive tract tissues with an area under the receiver operator curve (AUC) of 0.82. Additionally, normal tissue from the upper aerodigestive tract can be subclassified into squamous epithelium, muscle, and gland with an average AUC of 0.94. After separately training on thyroid tissue, the CNN can differentiate between thyroid carcinoma and normal thyroid with an AUC of 0.95, 92% accuracy, 92% sensitivity, and 92% specificity. Moreover, the CNN can discriminate medullary thyroid carcinoma from benign multinodular goiter (MNG) with an AUC of 0.93. Classical-type papillary thyroid carcinoma is differentiated from MNG with an AUC of 0.91. Our preliminary results demonstrate that an HSI-based optical biopsy method using CNNs can provide multicategory diagnostic information for normal and cancerous head-and-neck tissue, and more patient data are needed to fully investigate the potential and reliability of the proposed technique. (C) The Authors. Published by SPIE under a Creative Commons Attribution 4.0 Unported License.
引用
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页数:9
相关论文
共 40 条
[1]  
Abadi Martin, 2015, TENSORFLOW LARG MACH
[2]   Simultaneous occurrence of medullary and papillary thyroid microcarcinomas: A case series and review of the literature [J].
Adnan Z. ;
Arad E. ;
Dana J. ;
Shendler Y. ;
Baron E. .
Journal of Medical Case Reports, 7 (1)
[3]  
Ajila Vidya, 2015, J Sex Transm Dis, V2015, P791024, DOI 10.1155/2015/791024
[4]  
[Anonymous], P MACH LEARN RES
[5]  
[Anonymous], J BIOMED OPT
[6]  
[Anonymous], ADADELTA: An Adaptive Learning Rate Method
[7]  
[Anonymous], CANC BIOL THER
[8]   Detection of Squamous Cell Carcinoma and Corresponding Biomarkers Using Optical Spectroscopy [J].
Beumer, H. Wolfgang ;
Vishwanath, Karthik ;
Puscas, Liana ;
Afshari, Hamid R. ;
Ramanujam, Nimmi ;
Lee, Walter T. .
OTOLARYNGOLOGY-HEAD AND NECK SURGERY, 2011, 144 (03) :390-394
[9]   Taking advantage of hyperspectral imaging classification of urinary stones against conventional infrared spectroscopy [J].
Blanco, Francisco ;
Lumbreras, Felipe ;
Serrat, Joan ;
Siener, Roswitha ;
Serranti, Silvia ;
Bonifazi, Giuseppe ;
Lopez-Mesas, Montserrat ;
Valiente, Manuel .
JOURNAL OF BIOMEDICAL OPTICS, 2014, 19 (12)
[10]  
Dabelic N, 2010, COLLEGIUM ANTROPOL, V34, P349