AmiGO: online access to ontology and annotation data

被引：1360

作者：

Carbon, Seth ^{[1
]}

Ireland, Amelia ^{[2
]}

Mungall, Christopher J. ^{[1
]}

Shu, ShengQiang ^{[3
]}

Marshall, Brad ^{[1
]}

Lewis, Suzanna ^{[1
]}

机构：

[1] Lawrence Berkeley Natl Lab, Berkeley, CA 94720 USA

[2] European Bioinformat Inst, GO Editorial Off, Cambridge CB10 1SD, England

[3] Joint Genome Inst, Dept Energy, Walnut Creek, CA 94598 USA

来源：

BIOINFORMATICS | 2009年 / 25卷 / 02期

关键词：

D O I：

10.1093/bioinformatics/btn615

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

AmiGO is a web application that allows users to query, browse and visualize ontologies and related gene product annotation (association) data. AmiGO can be used online at the Gene Ontology (GO) website to access the data provided by the GO Consortium(1); it can also be downloaded and installed to browse local ontologies and annotations. 2 AmiGO is free open source software developed and maintained by the GO Consortium.

引用

页码：288 / 289

页数：2

共 3 条

[1]

ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999

[2] Gene Ontology: tool for the unification of biology [J].

Ashburner, M ;

Ball, CA ;

Blake, JA ;

Botstein, D ;

Butler, H ;

Cherry, JM ;

Davis, AP ;

Dolinski, K ;

Dwight, SS ;

Eppig, JT ;

Harris, MA ;

Hill, DP ;

Issel-Tarver, L ;

Kasarskis, A ;

Lewis, S ;

Matese, JC ;

Richardson, JE ;

Ringwald, M ;

Rubin, GM ;

Sherlock, G .

NATURE GENETICS, 2000, 25 (01) :25-29

[3] GO::TermFinder - open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes [J].

Boyle, EI ;

Weng, SA ;

Gollub, J ;

Jin, H ;

Botstein, D ;

Cherry, JM ;

Sherlock, G .

BIOINFORMATICS, 2004, 20 (18) :3710-3715

← 1 →