Long Non-coding MIR205HG Depletes Hsa-miR-590-3p Leading to Unrestrained Proliferation in Head and Neck Squamous Cell Carcinoma

被引:75
作者
Di Agostino, Silvia [1 ]
Valenti, Fabio [1 ]
Sacconi, Andrea [1 ]
Fontemaggi, Giulia [1 ]
Pallocca, Matteo [2 ]
Pulito, Claudio [3 ]
Ganci, Federica [1 ]
Muti, Paola [4 ]
Strano, Sabrina [3 ]
Blandino, Giovanni [1 ]
机构
[1] IRCCS Regina Elena Natl Canc Inst, Dept Diagnost Res & Technol Innovat, Oncogen & Epigenet Unit, I-00144 Rome, Italy
[2] IRCCS Regina Elena Natl Canc Inst, Dept Diagnost Res & Technol Innovat, SAFU Unit, I-00144 Rome, Italy
[3] IRCCS Regina Elena Natl Canc Inst, Dept Diagnost Res & Technol Innovat, Mol Chemoprevent Grp, I-00144 Rome, Italy
[4] McMaster Univ, Dept Oncol, Dofasco Chair Canc Expt Therapeut, Fac Hlth Sci, Hamilton, ON, Canada
关键词
gene-expression; non-coding RNA; proliferation; HNSCC; mutant p53/YAP; FUNCTION MUTANT P53; MUTATIONAL LANDSCAPE; MIR-205; RNA; MICRORNAS; CANCER; EXPRESSION; GAIN; INSIGHTS; TARGETS;
D O I
10.7150/thno.22167
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Over 70% of head & neck squamous cell carcinoma (HNSCC) patients carry TP53 oncogenic mutations. Here we studied the role of specific tumor-derived mutant p53 proteins in the aberrant transcription of long non-coding (lnc) MIR205HG gene in head and neck cancer cells. Methods: To understand the role of lncMIR205HG, that we showed to be transcriptionally regulated by mutant p53 in HNSCC, we have employed siRNA and shRNA in CAL27 and FaDu HNSCC cell lines to suppress p53 gene expression in ChIP assays and RT-qPCR. We validated our findings in a cohort of 522 HNSCC patients from The Cancer Genome Atlas Data Portal (TCGA). We further evaluated our results in 63 HNSCC tumor samples collected at our institute, 32 of which were characterized by mutated TP53 (missense mutations) while 31 were characterized by wild-type TP53. Results: Maturation of pre-MIR205HG transcript produces two non-coding RNAs, lncMIR205HG and hsa-miR-205-5p. Down-regulation of lncMIR205HG expression significantly reduced cell proliferation, cell migration and clonogenic activity of head and neck cancer cells. Expression of MIR205HG was significantly increased in HNSCC with mutated TP53 when compared with matched non-tumoral tissues. Furthermore, MIR205HG expression levels were significantly higher in tumoral samples with mutant p53 than in tumoral tissues expressing wild-type p53. Mechanistically, MIR205HG depletes endogenous miR-590-3p leading to increased cyclin B, cdk1, and YAP protein expression. Conclusions: Taken together, these findings identify a transcriptional and post-transcriptional molecular network that includes mutant p53 protein, lncMIR205HG, YAP, and other proliferation-related genes, which are enriched in HNSCC patients with poor prognosis.
引用
收藏
页码:1850 / 1868
页数:19
相关论文
共 69 条
[1]   Gain-of-function mutant p53 but not p53 deletion promotes head and neck cancer progression in response to oncogenic K-ras [J].
Acin, Sergio ;
Li, Zhongyou ;
Mejia, Olga ;
Roop, Dennis R. ;
El-Naggar, Adel K. ;
Caulin, Carlos .
JOURNAL OF PATHOLOGY, 2011, 225 (04) :479-489
[2]  
[Anonymous], 2008, GENOME BIOL
[3]   The microRNA.org resource: targets and expression [J].
Betel, Doron ;
Wilson, Manda ;
Gabow, Aaron ;
Marks, Debora S. ;
Sander, Chris .
NUCLEIC ACIDS RESEARCH, 2008, 36 :D149-D153
[4]   miR-10b*, a master inhibitor of the cell cycle, is down-regulated in human breast tumours [J].
Biagioni, Francesca ;
Ben-Moshe, Noa Bossel ;
Fontemaggi, Giulia ;
Canu, Valeria ;
Mori, Federica ;
Antoniani, Barbara ;
Di Benedetto, Anna ;
Santoro, Raffaela ;
Germoni, Sabrina ;
De Angelis, Fernanda ;
Cambria, Anna ;
Avraham, Roi ;
Grasso, Giuseppe ;
Strano, Sabrina ;
Muti, Paola ;
Mottolese, Marcella ;
Yarden, Yosef ;
Domany, Eytan ;
Blandino, Giovanni .
EMBO MOLECULAR MEDICINE, 2012, 4 (11) :1214-1229
[5]   Histones: Annotating Chromatin [J].
Campos, Eric I. ;
Reinberg, Danny .
ANNUAL REVIEW OF GENETICS, 2009, 43 :559-599
[6]   A Long Noncoding RNA Controls Muscle Differentiation by Functioning as a Competing Endogenous RNA [J].
Cesana, Marcella ;
Cacchiarelli, Davide ;
Legnini, Ivano ;
Santini, Tiziana ;
Sthandier, Olga ;
Chinappi, Mauro ;
Tramontano, Anna ;
Bozzoni, Irene .
CELL, 2011, 147 (02) :358-369
[7]   miRTarBase 2016: updates to the experimentally validated miRNA-target interactions database [J].
Chou, Chih-Hung ;
Chang, Nai-Wen ;
Shrestha, Sirjana ;
Hsu, Sheng-Da ;
Lin, Yu-Ling ;
Lee, Wei-Hsiang ;
Yang, Chi-Dung ;
Hong, Hsiao-Chin ;
Wei, Ting-Yen ;
Tu, Siang-Jyun ;
Tsai, Tzi-Ren ;
Ho, Shu-Yi ;
Jian, Ting-Yan ;
Wu, Hsin-Yi ;
Chen, Pin-Rong ;
Lin, Nai-Chieh ;
Huang, Hsin-Tzu ;
Yang, Tzu-Ling ;
Pai, Chung-Yuan ;
Tai, Chun-San ;
Chen, Wen-Liang ;
Huang, Chia-Yen ;
Liu, Chun-Chi ;
Weng, Shun-Long ;
Liao, Kuang-Wen ;
Hsu, Wen-Lian ;
Huang, Hsien-Da .
NUCLEIC ACIDS RESEARCH, 2016, 44 (D1) :D239-D247
[8]   Genomic Maps of Long Noncoding RNA Occupancy Reveal Principles of RNA-Chromatin Interactions [J].
Chu, Ci ;
Qu, Kun ;
Zhong, Franklin L. ;
Artandi, Steven E. ;
Chang, Howard Y. .
MOLECULAR CELL, 2011, 44 (04) :667-678
[9]   RAP: RNA-Seq Analysis Pipeline, a new cloud-based NGS web application [J].
D'Antonio, Mattia ;
De Meo, Paolo D'Onorio ;
Pallocca, Matteo ;
Picardi, Ernesto ;
D'Erchia, Anna Maria ;
Calogero, Raffaele A. ;
Castrignano, Tiziana ;
Pesole, Graziano .
BMC GENOMICS, 2015, 16
[10]   The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression [J].
Derrien, Thomas ;
Johnson, Rory ;
Bussotti, Giovanni ;
Tanzer, Andrea ;
Djebali, Sarah ;
Tilgner, Hagen ;
Guernec, Gregory ;
Martin, David ;
Merkel, Angelika ;
Knowles, David G. ;
Lagarde, Julien ;
Veeravalli, Lavanya ;
Ruan, Xiaoan ;
Ruan, Yijun ;
Lassmann, Timo ;
Carninci, Piero ;
Brown, James B. ;
Lipovich, Leonard ;
Gonzalez, Jose M. ;
Thomas, Mark ;
Davis, Carrie A. ;
Shiekhattar, Ramin ;
Gingeras, Thomas R. ;
Hubbard, Tim J. ;
Notredame, Cedric ;
Harrow, Jennifer ;
Guigo, Roderic .
GENOME RESEARCH, 2012, 22 (09) :1775-1789