Distance-Decay Relationships Partially Determine Diversity Patterns of Phyllosphere Bacteria on Tamrix Trees across the Sonoran Desert

被引:85
作者
Finkel, Omri M. [1 ]
Burch, Adrien Y. [2 ]
Elad, Tal [1 ]
Huse, Susan M. [3 ]
Lindow, Steven E. [2 ]
Post, Anton F. [3 ]
Belkin, Shimshon [1 ]
机构
[1] Hebrew Univ Jerusalem, Inst Life Sci, IL-91904 Jerusalem, Israel
[2] Univ Calif Berkeley, Dept Plant & Microbial Biol, Berkeley, CA 94720 USA
[3] Josephine Bay Paul Ctr Comparat Mol Biol & Evolut, Marine Biol Lab, Woods Hole, MA USA
基金
美国国家科学基金会;
关键词
MICROBIAL COMMUNITIES; RARE BIOSPHERE; ECOLOGY; BIOGEOGRAPHY; SIMILARITY; SEA;
D O I
10.1128/AEM.00888-12
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Dispersal limitation in phyllosphere communities was measured on the leaf surfaces of salt-excreting Tamarix trees, which offer unique, discrete habitats for microbial assemblages. We employed 16S rRNA gene pyrosequencing to measure bacterial community dissimilarity on leaves of spatially dispersed Tamarix specimens in sites with uniform climatic conditions across the Sonoran Desert in the Southwestern United States. Our analyses revealed diverse bacterial communities with four dominant phyla that exhibited differential effects of environmental and geographic variables. Geographical distance was the most important parameter that affected community composition, particularly that of betaproteobacteria, which displayed a statistically significant, distance-decay relationship.
引用
收藏
页码:6187 / 6193
页数:7
相关论文
共 37 条
[21]   The metacommunity concept: a framework for multi-scale community ecology [J].
Leibold, MA ;
Holyoak, M ;
Mouquet, N ;
Amarasekare, P ;
Chase, JM ;
Hoopes, MF ;
Holt, RD ;
Shurin, JB ;
Law, R ;
Tilman, D ;
Loreau, M ;
Gonzalez, A .
ECOLOGY LETTERS, 2004, 7 (07) :601-613
[22]  
MAC ARTHUR ROBERT H., 1967
[23]   Microbial biogeography:: putting microorganisms on the map [J].
Martiny, JBH ;
Bohannan, BJM ;
Brown, JH ;
Colwell, RK ;
Fuhrman, JA ;
Green, JL ;
Horner-Devine, MC ;
Kane, M ;
Krumins, JA ;
Kuske, CR ;
Morin, PJ ;
Naeem, S ;
Ovreås, L ;
Reysenbach, AL ;
Smith, VH ;
Staley, JT .
NATURE REVIEWS MICROBIOLOGY, 2006, 4 (02) :102-112
[24]  
MINCHIN PR, 1987, VEGETATIO, V71, P145
[25]   The distance decay of similarity in biogeography and ecology [J].
Nekola, JC ;
White, PS .
JOURNAL OF BIOGEOGRAPHY, 1999, 26 (04) :867-878
[26]  
Oksanen J., 2013, Package 'vegan, V2.0-10
[27]   Removing Noise From Pyrosequenced Amplicons [J].
Quince, Christopher ;
Lanzen, Anders ;
Davenport, Russell J. ;
Turnbaugh, Peter J. .
BMC BIOINFORMATICS, 2011, 12
[28]   Drop-size soda lakes: Transient microbial habitats on a salt-secreting desert tree [J].
Qvit-Raz, Noga ;
Jurkevitch, Edouard ;
Belkin, Shimshon .
GENETICS, 2008, 178 (03) :1615-1622
[29]   Biogeographical diversity of leaf-associated microbial communities from salt-secreting Tamarix trees of the Dead Sea region [J].
Qvit-Raz, Noga ;
Finkel, Omri M. ;
Al-Deeb, Taghleb M. ;
Malkawi, Hanan I. ;
Hindiyeh, Muna Y. ;
Jurkevitch, Edouard ;
Belkin, Shimshon .
RESEARCH IN MICROBIOLOGY, 2012, 163 (02) :142-150
[30]   The ecology of the phyllosphere: geographic and phylogenetic variability in the distribution of bacteria on tree leaves [J].
Redford, Amanda J. ;
Bowers, Robert M. ;
Knight, Rob ;
Linhart, Yan ;
Fierer, Noah .
ENVIRONMENTAL MICROBIOLOGY, 2010, 12 (11) :2885-2893