Reconstitution of recombination-associated DNA synthesis with human proteins

被引:46
作者
Sneeden, Jessica L. [1 ]
Grossi, Sara M. [1 ]
Tappin, Inger [2 ]
Hurwitz, Jerard [2 ]
Heyer, Wolf-Dietrich [1 ,3 ]
机构
[1] Univ Calif Davis, Dept Microbiol & Mol Genet, Davis, CA 95616 USA
[2] Mem Sloan Kettering Canc Ctr, Program Mol Biol, New York, NY 10021 USA
[3] Univ Calif Davis, Dept Mol & Cellular Biol, Davis, CA 95616 USA
基金
美国国家卫生研究院;
关键词
STRAND BREAK REPAIR; REPLICATION FACTOR-C; XERODERMA-PIGMENTOSUM VARIANT; POLYMERASE DELTA HOLOENZYME; OKAZAKI FRAGMENT MATURATION; GENE CONVERSION TRACTS; CELL NUCLEAR ANTIGEN; HOMOLOGOUS RECOMBINATION; SACCHAROMYCES-CEREVISIAE; IN-VITRO;
D O I
10.1093/nar/gkt192
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The repair of DNA breaks by homologous recombination is a high-fidelity process, necessary for the maintenance of genome integrity. Thus, DNA synthesis associated with recombinational repair must be largely error-free. In this report, we show that human DNA polymerase delta (delta) is capable of robust DNA synthesis at RAD51-mediated recombination intermediates dependent on the processivity clamp PCNA. Translesion synthesis polymerase eta (eta) also extends these substrates, albeit far less processively. The single-stranded DNA binding protein RPA facilitates recombination-mediated DNA synthesis by increasing the efficiency of primer utilization, preventing polymerase stalling at specific sequence contexts, and overcoming polymerase stalling caused by topological constraint allowing the transition to a migrating D-loop. Our results support a model whereby the high-fidelity replicative DNA polymerase delta performs recombination-associated DNA synthesis, with translesion synthesis polymerases providing a supportive role as in normal replication.
引用
收藏
页码:4913 / 4925
页数:13
相关论文
共 67 条
[1]   Drosophila BLM in double-strand break repair by synthesis-dependent strand annealing [J].
Adams, MD ;
McVey, M ;
Sekelsky, JJ .
SCIENCE, 2003, 299 (5604) :265-267
[2]   Okazaki fragment maturation in yeast - I. Distribution of functions between FEN1 AND DNA2 [J].
Ayyagari, R ;
Gomes, XV ;
Gordenin, DA ;
Burgers, PMJ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (03) :1618-1625
[3]   Catalysis of strand annealing by replication protein A derives from its strand melting properties [J].
Bartos, Jeremy D. ;
Willmott, Lyndsay J. ;
Binz, Sara K. ;
Wold, Marc S. ;
Bambara, Robert A. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2008, 283 (31) :21758-21768
[4]   Studies on Human DNA Polymerase ε and GINS Complex and Their Role in DNA Replication [J].
Bermudez, Vladimir P. ;
Farina, Andrea ;
Raghavan, Vineetha ;
Tappin, Inger ;
Hurwitz, Jerard .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2011, 286 (33) :28963-28977
[5]   Functional assays for replication protein A (RPA) [J].
Binz, Sara K. ;
Dickson, Anne M. ;
Haring, Stuart J. ;
Wold, Marc S. .
DNA REPAIR, PT B, 2006, 409 :11-+
[6]   Rad54 dissociates homologous recombination intermediates by branch migration [J].
Bugreev, Dmitry V. ;
Hanaoka, Fumio ;
Mazin, Alexander V. .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2007, 14 (08) :746-753
[7]   Ca2+ activates human homologous recombination protein Rad51 by modulating its ATPase activity [J].
Bugreev, DV ;
Mazin, AV .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (27) :9988-9993
[8]   Polymerase Dynamics at the Eukaryotic DNA Replication Fork [J].
Burgers, Peter M. J. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2009, 284 (07) :4041-4045
[9]   Reconstitution of human replication factor C from its five subunits in baculovirus-infected insect cells [J].
Cai, JS ;
Uhlmann, F ;
Gibbs, E ;
FloresRozas, H ;
Lee, CG ;
Phillips, B ;
Finkelstein, J ;
Yao, N ;
ODonnell, M ;
Hurwitz, J .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (23) :12896-12901
[10]   The eukaryotic leading and lagging strand DNA polymerases are loaded onto primer-ends via separate mechanisms but have comparable processivity in the presence of PCNA [J].
Chilkova, Olga ;
Stenlund, Peter ;
Isoz, Isabelle ;
Stith, Carrie M. ;
Grabowski, Pawel ;
Lundstroem, Else-Britt ;
Burgers, Peter M. ;
Johansson, Erik .
NUCLEIC ACIDS RESEARCH, 2007, 35 (19) :6588-6597