Background inhibited and speed-loss-free volumetric imaging in vivo based on structured-illumination Fourier light field microscopy

被引:2
作者
Zhai, Jiazhen [1 ]
Shi, Ruheng [1 ]
Fan, Kuikui [1 ]
Kong, Lingjie [1 ,2 ]
机构
[1] Tsinghua Univ, Dept Precis Instrument, State Key Lab Precis Measurement Technol & Instrum, Beijing, Peoples R China
[2] Tsinghua Univ, IDG McGovern Inst Brain Res, Beijing, Peoples R China
基金
中国国家自然科学基金;
关键词
Fourier light field microscopy; structured-illumination; large-scale imaging; high resolution imaging; fast volumetric imaging; background inhibited; speed-loss-free; HIGH-RESOLUTION; NEURONAL-ACTIVITY; DECONVOLUTION; DYNAMICS; SPECKLE; PLANAR;
D O I
10.3389/fnins.2022.1004228
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Benefiting from its advantages in fast volumetric imaging for recording biodynamics, Fourier light field microscopy (FLFM) has a wide range of applications in biomedical research, especially in neuroscience. However, the imaging quality of the FLFM is always deteriorated by both the out-of-focus background and the strong scattering in biological samples. Here we propose a structured-illumination and interleaved-reconstruction based Fourier light field microscopy (SI-FLFM), in which we can filter out the background fluorescence in FLFM without sacrificing imaging speed. We demonstrate the superiority of our SI-FLFM in high-speed, background-inhibited volumetric imaging of various biodynamics in larval zebrafish and mice in vivo. The signal-to-background ratio (SBR) is improved by tens of times. And the volumetric imaging speed can be up to 40 Hz, avoiding artifacts caused by temporal under-sampling in conventional structured illumination microscopy. These suggest that our SI-FLFM is suitable for applications of weak fluorescence signals but high imaging speed requirements.
引用
收藏
页数:12
相关论文
共 53 条
  • [1] Bouchard MB, 2015, NAT PHOTONICS, V9, P113, DOI [10.1038/nphoton.2014.323, 10.1038/NPHOTON.2014.323]
  • [2] Fluorescence endomicroscopy with structured illumination
    Bozinovic, Nenad
    Ventalon, Cathie
    Ford, Tim
    Mertz, Jerome
    [J]. OPTICS EXPRESS, 2008, 16 (11) : 8016 - 8025
  • [3] Wave optics theory and 3-D deconvolution for the light field microscope
    Broxton, Michael
    Grosenick, Logan
    Yang, Samuel
    Cohen, Noy
    Andalman, Aaron
    Deisseroth, Karl
    Levoy, Marc
    [J]. OPTICS EXPRESS, 2013, 21 (21): : 25418 - 25439
  • [4] Lensless light-field imaging through diffuser encoding
    Cai, Zewei
    Chen, Jiawei
    Pedrini, Giancarlo
    Osten, Wolfgang
    Liu, Xiaoli
    Peng, Xiang
    [J]. LIGHT-SCIENCE & APPLICATIONS, 2020, 9 (01)
  • [5] Real-time multi-angle projection imaging of biological dynamics
    Chang, Bo-Jui
    Manton, James D.
    Sapoznik, Etai
    Pohlkamp, Theresa
    Terrones, Tamara S.
    Welf, Erik S.
    Murali, Vasanth S.
    Roudot, Philippe
    Hake, Kayley
    Whitehead, Lachlan
    York, Andrew G.
    Dean, Kevin M.
    Fiolka, Reto
    [J]. NATURE METHODS, 2021, 18 (07) : 829 - +
  • [6] Design of a high-resolution light field miniscope for volumetric imaging in scattering tissue
    Chen, Yanqin
    Xiong, Bo
    Xue, Yujia
    Jin, Xin
    Greene, Joseph
    Tian, Lei
    [J]. BIOMEDICAL OPTICS EXPRESS, 2020, 11 (03): : 1662 - 1678
  • [7] Rapid whole brain imaging of neural activity in freely behaving larval zebrafish (Danio rerio)
    Cong, Lin
    Wang, Zeguan
    Chai, Yuming
    Hang, Wei
    Shang, Chunfeng
    Yang, Wenbin
    Bai, Lu
    Du, Jiulin
    Wang, Kai
    Wen, Quan
    [J]. ELIFE, 2017, 6
  • [8] High-speed, cortex-wide volumetric recording of neuroactivity at cellular resolution using light beads microscopy
    Demas, Jeffrey
    Manley, Jason
    Tejera, Frank
    Barber, Kevin
    Kim, Hyewon
    Traub, Francisca Martinez
    Chen, Brandon
    Vaziri, Alipasha
    [J]. NATURE METHODS, 2021, 18 (09) : 1103 - +
  • [9] High-speed volumetric two-photon fluorescence imaging of neurovascular dynamics
    Fan, Jiang Lan
    Rivera, Jose A.
    Sun, Wei
    Peterson, John
    Haeberle, Henry
    Rubin, Sam
    Ji, Na
    [J]. NATURE COMMUNICATIONS, 2020, 11 (01)
  • [10] Light field microscopy based on structured light illumination
    Fu, Zhiqiang
    Geng, Qiang
    Chen, Jialong
    Chu, Li-An
    Chiang, Ann-Shyn
    Chen, Shih-Chi
    [J]. OPTICS LETTERS, 2021, 46 (14) : 3424 - 3427