Limited clinical utility for GWAS or polygenic risk score for postoperative acute kidney injury in non-cardiac surgery in European-ancestry patients

被引:6
作者
Larach, Daniel B. [1 ]
Lewis, Adam [2 ]
Bastarache, Lisa [2 ]
Pandit, Anita [3 ]
He, Jing [2 ]
Sinha, Anik [4 ]
Douville, Nicholas J. [4 ,5 ]
Heung, Michael [6 ]
Mathis, Michael R. [4 ,7 ]
Mosley, Jonathan D. [2 ,8 ]
Wanderer, Jonathan P. [1 ,2 ]
Kheterpal, Sachin [4 ]
Zawistowski, Matthew [3 ]
Brummett, Chad M. [4 ]
Siew, Edward D. [9 ,10 ]
Robinson-Cohen, Cassianne [11 ]
Kertai, Miklos D. [12 ]
机构
[1] Vanderbilt Univ, Med Ctr, Dept Anesthesiol, Nashville, TN USA
[2] Vanderbilt Univ, Dept Biomed Informat, Med Ctr, Nashville, TN USA
[3] Univ Michigan, Dept Biostat, Ann Arbor, MI 48109 USA
[4] Univ Michigan, Dept Anesthesiol, Ann Arbor, MI 48109 USA
[5] Univ Michigan, Inst Healthcare Policy & Innovat, Ann Arbor, MI 48109 USA
[6] Univ Michigan, Dept Internal Med, Div Nephrol, Ann Arbor, MI 48109 USA
[7] Univ Michigan, Dept Computat Med & Bioinformat, Ann Arbor, MI 48109 USA
[8] Vanderbilt Univ, Med Ctr, Dept Med, Nashville, TN USA
[9] Nashville Vet Affairs Hosp, Vanderbilt Ctr Kidney Dis VCKD, Div Nephrol & Hypertens, Tennessee Valley Hlth Syst, Nashville, TN USA
[10] Nashville Vet Affairs Hosp, Integrated Program AKI VIP AKI, Nashville, TN USA
[11] Vanderbilt Univ, Vanderbilt OBrien Kidney Ctr, Dept Med, Div Nephrol & Hypertens,Med Ctr, Nashville, TN USA
[12] Vanderbilt Univ, Dept Anesthesiol, Div Adult Cardiothorac Anesthesiol, Med Ctr, 1211 21st Ave South,Med Arts Bldg,Off 526E, Nashville, TN 37212 USA
关键词
Acute kidney injury; Genome-wide association study; Polygenic risk score; Surgery; GENOME-WIDE ASSOCIATION; MORTALITY; PRESSURE; AKI; DIALYSIS; OUTCOMES; BYPASS;
D O I
10.1186/s12882-022-02964-8
中图分类号
R5 [内科学]; R69 [泌尿科学(泌尿生殖系疾病)];
学科分类号
1002 ; 100201 ;
摘要
Background Prior studies support a genetic basis for postoperative acute kidney injury (AKI). We conducted a genome-wide association study (GWAS), assessed the clinical utility of a polygenic risk score (PRS), and estimated the heritable component of AKI in patients who underwent noncardiac surgery. Methods We performed a retrospective large-scale genome-wide association study followed by a meta-analysis of patients who underwent noncardiac surgery at the Vanderbilt University Medical Center ("Vanderbilt" cohort) or Michigan Medicine, the academic medical center of the University of Michigan ("Michigan" cohort). In the Vanderbilt cohort, the relationship between polygenic risk score for estimated glomerular filtration rate and postoperative AKI was also tested to explore the predictive power of aggregating multiple common genetic variants associated with AKI risk. Similarly, in the Vanderbilt cohort genome-wide complex trait analysis was used to estimate the heritable component of AKI due to common genetic variants. Results The study population included 8248 adults in the Vanderbilt cohort (mean [SD] 58.05 [15.23] years, 50.2% men) and 5998 adults in Michigan cohort (56.24 [14.76] years, 49% men). Incident postoperative AKI events occurred in 959 patients (11.6%) and in 277 patients (4.6%), respectively. No loci met genome-wide significance in the GWAS and meta-analysis. PRS for estimated glomerular filtration rate explained a very small percentage of variance in rates of postoperative AKI and was not significantly associated with AKI (odds ratio 1.050 per 1 SD increase in polygenic risk score [95% CI, 0.971-1.134]). The estimated heritability among common variants for AKI was 4.5% (SE = 4.5%) suggesting low heritability. Conclusion The findings of this study indicate that common genetic variation minimally contributes to postoperative AKI after noncardiac surgery, and likely has little clinical utility for identifying high-risk patients.
引用
收藏
页数:11
相关论文
共 42 条
[1]   Phenotypic and molecular spectrum of pyridoxamine-5′-phosphate oxidase deficiency: A scoping review of 87 cases of pyridoxamine-5′-phosphate oxidase deficiency [J].
Alghamdi, Malak ;
Bashiri, Fahad A. ;
Abdelhakim, Marwa ;
Adly, Nouran ;
Jamjoom, Dima Z. ;
Sumaily, Khalid M. ;
Alghanem, Bandar ;
Arold, Stefan T. .
CLINICAL GENETICS, 2021, 99 (01) :99-110
[2]  
Basson J, 2014, AM J HYPERTENS, V27, P431, DOI [10.1093/ajh/hpt283, 10.1093/ajh/hpu149]
[3]   Long-Term Risk of Mortality and Acute Kidney Injury During Hospitalization After Major Surgery [J].
Bihorac, Azra ;
Yavas, Sinan ;
Subbiah, Sophie ;
Hobson, Charles E. ;
Schold, Jesse D. ;
Gabrielli, Andrea ;
Layon, A. Joseph ;
Segal, Mark S. .
ANNALS OF SURGERY, 2009, 249 (05) :851-858
[4]   Genetic Susceptibility to Chronic Kidney Disease - Some More Pieces for the Heritability Puzzle [J].
Canadas-Garre, Marisa ;
Anderson, Kerry ;
Cappa, Ruaidhri ;
Skelly, Ryan ;
Smyth, Laura Jane ;
McKnight, Amy Jayne ;
Maxwell, Alexander Peter .
FRONTIERS IN GENETICS, 2019, 10
[5]   Use of a Polygenic Risk Score Improves Prediction of Myocardial Injury After Non-Cardiac Surgery [J].
Douville, Nicholas J. ;
Surakka, Ida ;
Leis, Aleda ;
Douville, Christopher B. ;
Hornsby, Whitney E. ;
Brummett, Chad M. ;
Kheterpal, Sachin ;
Willer, Cristen J. ;
Engoren, Milo ;
Mathis, Michael R. .
CIRCULATION-GENOMIC AND PRECISION MEDICINE, 2020, 13 (04) :e002817
[6]   Predicting Hospital-Acquired Acute Kidney Injury - A Case-Controlled Study [J].
Drawz, Paul E. ;
Miller, R. Tyler ;
Sehgal, Ashwini R. .
RENAL FAILURE, 2008, 30 (09) :848-855
[7]   Comorbidity measures for use with administrative data [J].
Elixhauser, A ;
Steiner, C ;
Harris, DR ;
Coffey, RN .
MEDICAL CARE, 1998, 36 (01) :8-27
[8]   Identifying the Patient at Risk of Acute Kidney Injury: A Predictive Scoring System for the Development of Acute Kidney Injury in Acute Medical Patients [J].
Forni, Lui G. ;
Dawes, Thomas ;
Sinclair, Hamish ;
Cheek, Elizabeth ;
Bewick, Vivien ;
Dennis, Mark ;
Venn, Richard .
NEPHRON CLINICAL PRACTICE, 2013, 123 (3-4) :143-150
[9]   Survival and renal recovery after acute kidney injury requiring dialysis outside of intensive care units [J].
Gonzalez Sanchidrian, Silvia ;
Deira Lorenzo, Javier L. ;
Bermejo, M. Jimena Mucino ;
Labrador Gomez, Pedro J. ;
Gomez-Martino Arroyo, Juan R. ;
Aresu, Stefania ;
Tonini, Enrico ;
Armignacco, Paolo ;
Ronco, Claudio .
INTERNATIONAL UROLOGY AND NEPHROLOGY, 2020, 52 (12) :2367-2377
[10]   Sex-specific and pleiotropic effects underlying kidney function identified from GWAS meta-analysis [J].
Graham, Sarah E. ;
Nielsen, Jonas B. ;
Zawistowski, Matthew ;
Zhou, Wei ;
Fritsche, Lars G. ;
Gabrielsen, Maiken E. ;
Skogholt, Anne Heidi ;
Surakka, Ida ;
Hornsby, Whitney E. ;
Fermin, Damian ;
Larach, Daniel B. ;
Kheterpal, Sachin ;
Brummett, Chad M. ;
Lee, Seunggeun ;
Kang, Hyun Min ;
Abecasis, Goncalo R. ;
Romundstad, Solfrid ;
Hallan, Stein ;
Sampson, Matthew G. ;
Hveem, Kristian ;
Willer, Cristen J. .
NATURE COMMUNICATIONS, 2019, 10 (1)