Opportunities for Live Cell FT-Infrared Imaging: Macromolecule Identification with 2D and 3D Localization

被引:26
作者
Mattson, Eric C. [1 ]
Aboualizadeh, Ebrahim [1 ]
Barabas, Marie E. [2 ]
Stucky, Cheryl L. [2 ]
Hirschmugl, Carol J. [1 ]
机构
[1] Univ Wisconsin, Dept Phys, Milwaukee, WI 53211 USA
[2] Med Coll Wisconsin, Dept Cell Biol Neurobiol & Anat, Milwaukee, WI 53226 USA
关键词
infrared spectromicroscopy; flow cell; raster scanning; microtomography; transflection; scattering; deconvolution; Thalassiosira weissflogii; sensory neurons; FOCAL-PLANE ARRAY; SYNCHROTRON-RADIATION; BIOLOGICAL CELLS; MICROSPECTROSCOPY; RESOLUTION; SPECTROMICROSCOPY; MICROSCOPY; CHEMISTRY; TISSUE; DISCRIMINATION;
D O I
10.3390/ijms141122753
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Infrared (IR) spectromicroscopy, or chemical imaging, is an evolving technique that is poised to make significant contributions in the fields of biology and medicine. Recent developments in sources, detectors, measurement techniques and speciman holders have now made diffraction-limited Fourier transform infrared (FTIR) imaging of cellular chemistry in living cells a reality. The availability of bright, broadband IR sources and large area, pixelated detectors facilitate live cell imaging, which requires rapid measurements using non-destructive probes. In this work, we review advances in the field of FTIR spectromicroscopy that have contributed to live-cell two and three-dimensional IR imaging, and discuss several key examples that highlight the utility of this technique for studying the structure and chemistry of living cells.
引用
收藏
页码:22753 / 22781
页数:29
相关论文
共 85 条
[1]  
[Anonymous], 2004, INFRARED SPECTROSCOP, DOI [10.1002/0470011149, DOI 10.1002/0470011149]
[2]   Characterization of an RNA bulge structure by Fourier transform infrared spectroscopy [J].
Banyay, M ;
Sandbrink, J ;
Strömberg, R ;
Gräslund, A .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2004, 324 (02) :634-639
[3]   A library of IR bands of nucleic acids in solution [J].
Banyay, M ;
Sarkar, M ;
Gräslund, A .
BIOPHYSICAL CHEMISTRY, 2003, 104 (02) :477-488
[4]   Cellular and Molecular Mechanisms of Pain [J].
Basbaum, Allan I. ;
Bautista, Diana M. ;
Scherrer, Gregory ;
Julius, David .
CELL, 2009, 139 (02) :267-284
[5]   The inherent problem of transflection-mode infrared spectroscopic microscopy and the ramifications for biomedical single point and imaging applications [J].
Bassan, Paul ;
Lee, Joe ;
Sachdeva, Ashwin ;
Pissardini, Juliana ;
Dorling, Konrad M. ;
Fletcher, John S. ;
Henderson, Alex ;
Gardner, Peter .
ANALYST, 2013, 138 (01) :144-157
[6]   FTIR microscopy of biological cells and tissue: data analysis using resonant Mie scattering (RMieS) EMSC algorithm [J].
Bassan, Paul ;
Sachdeva, Ashwin ;
Kohler, Achim ;
Hughes, Caryn ;
Henderson, Alex ;
Boyle, Jonathan ;
Shanks, Jonathan H. ;
Brown, Michael ;
Clarke, Noel W. ;
Gardner, Peter .
ANALYST, 2012, 137 (06) :1370-1377
[7]   RMieS-EMSC correction for infrared spectra of biological cells: Extension using full Mie theory and GPU computing [J].
Bassan, Paul ;
Kohler, Achim ;
Martens, Harald ;
Lee, Joe ;
Jackson, Edward ;
Lockyer, Nicholas ;
Dumas, Paul ;
Brown, Michael ;
Clarke, Noel ;
Gardner, Peter .
JOURNAL OF BIOPHOTONICS, 2010, 3 (8-9) :609-620
[8]   Resonant Mie Scattering (RMieS) correction of infrared spectra from highly scattering biological samples [J].
Bassan, Paul ;
Kohler, Achim ;
Martens, Harald ;
Lee, Joe ;
Byrne, Hugh J. ;
Dumas, Paul ;
Gazi, Ehsan ;
Brown, Michael ;
Clarke, Noel ;
Gardner, Peter .
ANALYST, 2010, 135 (02) :268-277
[9]   Resonant Mie scattering in infrared spectroscopy of biological materials - understanding the 'dispersion artefact' [J].
Bassan, Paul ;
Byrne, Hugh J. ;
Bonnier, Franck ;
Lee, Joe ;
Dumas, Paul ;
Gardner, Peter .
ANALYST, 2009, 134 (08) :1586-1593
[10]   Reflection contributions to the dispersion artefact in FTIR spectra of single biological cells [J].
Bassan, Paul ;
Byrne, Hugh J. ;
Lee, Joe ;
Bonnier, Franck ;
Clarke, Colin ;
Dumas, Paul ;
Gazi, Ehsan ;
Brown, Michael D. ;
Clarke, Noel W. ;
Gardner, Peter .
ANALYST, 2009, 134 (06) :1171-1175