Dataset for transcriptome analysis of Salmonella enterica subsp. enterica serovar Typhimurium strain 14028S response to starvation

被引：1

作者：

Gogoleva, Natalia E. ^{[1
,2
]}

Kataev, Vladimir Ya. ^{[2
]}

Balkin, Alexander S. ^{[2
]}

Plotnikov, Andrey O. ^{[2
]}

Shagimardanova, Elena I. ^{[3
]}

Subbot, Anastasia M. ^{[4
]}

Cherkasov, Sergey V. ^{[2
]}

Gogolev, Yuri V. ^{[1
,3
]}

机构：

[1] RAS, FRC Kazan Sci Ctr, Kazan Inst Biochem & Biophys, 2-31 Lobachevsky St, Kazan 420111, Russia

[2] Russian Acad Sci, Inst Cellular & Intracellular Symbiosis, Ural Branch, 11 Pionerskaya St, Orenburg 460000, Russia

[3] Kazan Volga Reg Fed Univ, Inst Fundamental Med & Biol, 18 Kremlyovskaya St, Kazan 420111, Russia

[4] Res Inst Eye Dis, 11 Rossolimo St, Moscow 119021, Russia

来源：

DATA IN BRIEF | 2020年 / 31卷

基金：

俄罗斯科学基金会;

关键词：

Salmonella enterica; Starvation; Low-density population; Rna-seq; Illumina;

D O I：

10.1016/j.dib.2020.106008

中图分类号：

O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

Salmonella enterica is an ubiquitous pathogen throughout the world causing gastroenteritis in humans and animals. Sur-vival of pathogenic bacteria in the external environment may be associated with the ability to overcome the stress caused by starvation. The bacterial response to starvation is well un-derstood in laboratory cultures with a sufficiently high cell density. However, bacterial populations often have a small size when facing this challenge in natural biotopes. The aim of this work was to find out if there are differences in the transcriptomes of S. enterica depending on the factor of cell density during starvation. Here we present transcrip-tome data of Salmonella enterica subsp. enterica serovar Ty-phimurium str. 14028S grown in carbon rich or carbon de-ficient medium with high or low cell density. These data will help identify genes involved in adaptation of low-density bacterial populations to starvation conditions. (c) 2020 The Author(s). Published by Elsevier Inc. This is an open access article under the CC BY license. (http://creativecommons.org/licenses/by/4.0/ )

引用

页数：7