Crystallization and preliminary crystallographic analysis of the circadian clock protein KaiB from the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1

被引:6
作者
Iwase, R
Imada, K
Hayashi, F
Uzumaki, T
Namba, K
Ishiura, M
机构
[1] Osaka Univ, Grad Sch Frontier Biosci, Suita, Osaka 5650871, Japan
[2] Nagoya Univ, Ctr Gene Res, Chikusa Ku, Nagoya, Aichi 4648602, Japan
[3] Nagoya Univ, Grad Sch Sci, Div Biol Sci, Chikusa Ku, Nagoya, Aichi 4648602, Japan
[4] JST, ICORP, Dynam Nanomachine Project, Suita, Osaka 5650871, Japan
[5] Nagoya Univ, BRAIN, Chikusa Ku, Nagoya, Aichi 4648602, Japan
来源
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY | 2004年 / 60卷
关键词
D O I
10.1107/S0907444904002112
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
KaiB is a component of the circadian clock oscillator in cyanobacteria, which are the simplest organisms that exhibit circadian rhythms. KaiB consists of 108 amino-acid residues and has a molecular weight of 12 025 Da. KaiB and Cys-substituted KaiB mutants from the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1 were expressed as GST-fusion proteins in Escherichia coli, purified and crystallized. The crystals of wild-type KaiB belong to the monoclinic space group P2(1), with unit-cell parameters a=89.6, b=71.2, c=106.8 Angstrom, beta=100.1degrees. While the native crystals diffract to 3.7 Angstrom, osmium derivatives, which show an approximately 4 Angstrom shrinkage in the b axis, diffract to 2.6 Angstrom. The crystals of the singly Cys-substituted mutant T64C with Hg, which show different morphology, diffract to 2.5 Angstrom and belong to the monoclinic space group P2, with unit-cell parameters a=63.7, b=33.4, c=93.7 Angstrom, beta=100.1degrees. Anomalous difference Patterson maps of the Os- and Hg-derivative crystals had significant peaks in their Harker sections, suggesting that both derivatives are suitable for structure determination.
引用
收藏
页码:727 / 729
页数:3
相关论文
共 13 条
[1]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[2]   Molecular bases for circadian clocks [J].
Dunlap, JC .
CELL, 1999, 96 (02) :271-290
[3]   ATP-induced hexameric ring structure of the cyanobacterial circadian clock protein KaiC [J].
Hayashi, F ;
Suzuki, H ;
Iwase, R ;
Uzumaki, T ;
Miyake, A ;
Shen, JR ;
Imada, K ;
Furukawa, Y ;
Yonekura, K ;
Namba, K ;
Ishiura, M .
GENES TO CELLS, 2003, 8 (03) :287-296
[4]   Expression of a gene cluster kaiABC as a circadian feedback process in cyanobacteria [J].
Ishiura, M ;
Kutsuna, S ;
Aoki, S ;
Iwasaki, H ;
Andersson, CR ;
Tanabe, A ;
Golden, SS ;
Johnson, CH ;
Kondo, T .
SCIENCE, 1998, 281 (5382) :1519-1523
[5]   KaiA-stimulated KaiC phosphorylation in circadian timing loops in cyanobacteria [J].
Iwasaki, H ;
Nishiwaki, T ;
Kitayama, Y ;
Nakajima, M ;
Kondo, T .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (24) :15788-15793
[6]   Physical interactions among circadian clock proteins KaiA, KaiB and KaiC in cyanobacteria [J].
Iwasaki, H ;
Taniguchi, Y ;
Ishiura, M ;
Kondo, T .
EMBO JOURNAL, 1999, 18 (05) :1137-1145
[7]  
Leslie A. G. W., 1992, JNT CCP4 ESF EAMCB N, V26, P27
[8]   SOLVENT CONTENT OF PROTEIN CRYSTALS [J].
MATTHEWS, BW .
JOURNAL OF MOLECULAR BIOLOGY, 1968, 33 (02) :491-+
[9]   Circadian clock protein KaiC forms ATP-dependent hexameric rings and binds DNA [J].
Mori, T ;
Saveliev, SV ;
Xu, Y ;
Stafford, WF ;
Cox, MM ;
Inman, RB ;
Johnson, CH .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (26) :17203-17208
[10]   Mutations in KaiA, a clock protein, extend the period of circadian rhythm in the cyanobacterium Synechococcus elongatus PCC 7942 [J].
Nishimura, H ;
Nakahira, Y ;
Imai, K ;
Tsuruhara, A ;
Kondo, H ;
Hayashi, H ;
Hirai, M ;
Saito, H ;
Kondo, T .
MICROBIOLOGY-SGM, 2002, 148 :2903-2909