Mouse Models and Online Resources for Functional Analysis of Osteoporosis Genome-Wide Association Studies

被引:10
作者
Maynard, Robert D. [1 ]
Ackert-Bicknell, Cheryl L. [1 ,2 ]
机构
[1] Univ Rochester, Ctr Musculoskeletal Res, Rochester, NY 14627 USA
[2] Univ Rochester, Dept Orthopaed & Rehabil, Rochester, NY 14627 USA
来源
FRONTIERS IN ENDOCRINOLOGY | 2019年 / 10卷
基金
美国国家卫生研究院;
关键词
osteoporosis; mouse models; genetics; bone; functional validation; BONE-MINERAL DENSITY; QUANTITATIVE TRAIT LOCI; VERTEBRAL FRACTURE; GENETIC-VARIANTS; INBRED STRAINS; KNOCKOUT MICE; OSTEOBLAST; DISEASE; RISK; DIFFERENTIATION;
D O I
10.3389/fendo.2019.00277
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Osteoporosis is a complex genetic disease in which the number of loci associated with the bone mineral density, a clinical risk factor for fracture, has increased at an exponential rate in the last decade. The identification of the causative variants and candidate genes underlying these loci has not been able to keep pace with the rate of locus discovery. A large number of tools and data resources have been built around the use of the mouse as model of human genetic disease. Herein, we describe resources available for functional validation of human Genome Wide Association Study (GWAS) loci using mouse models. We specifically focus on large-scale phenotyping efforts focused on bone relevant phenotypes and repositories of genotype-phenotype data that exist for transgenic and mutant mice, which can be readily mined as a first step toward more targeted efforts designed to deeply characterize the role of a gene in bone biology.
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页数:15
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共 118 条
  • [101] A 52-kb deletion in the SOST-MEOX1 intergenic region on 17q12-q21 is associated with van Buchem disease in the Dutch population
    Staehling-Hampton, K
    Proll, S
    Paeper, BW
    Zhao, L
    Charmley, P
    Brown, A
    Gardner, JC
    Galas, D
    Schatzman, RC
    Beighton, P
    Papapoulos, S
    Hamersma, H
    Brunkow, ME
    [J]. AMERICAN JOURNAL OF MEDICAL GENETICS, 2002, 110 (02): : 144 - 152
  • [102] Assessment of the genetic and clinical determinants of fracture risk: genome wide association and mendelian randomisation study
    Trajanoska, Katerina
    Morris, John A.
    Oei, Ling
    Zheng, Hou-Feng
    Evans, David M.
    Kiel, Douglas P.
    Ohlsson, Claes
    Richards, J. Brent
    Rivadeneira, Fernando
    [J]. BMJ-BRITISH MEDICAL JOURNAL, 2018, 362
  • [103] Further understanding human disease genes by comparing with housekeeping genes and other genes
    Tu, ZD
    Wang, L
    Xu, M
    Zhou, XH
    Chen, T
    Sun, FZ
    [J]. BMC GENOMICS, 2006, 7 (1)
  • [104] Genetic regulation of cortical and trabecular bone strength and microstructure in inbred strains of mice
    Turner, CH
    Hsieh, YF
    Müller, R
    Bouxsein, ML
    Baylink, DJ
    Rosen, CJ
    Grynpas, MD
    Donahue, LR
    Beamer, WG
    [J]. JOURNAL OF BONE AND MINERAL RESEARCH, 2000, 15 (06) : 1126 - 1131
  • [105] Passenger Mutations Confound Interpretation of All Genetically Modified Congenic Mice
    Vanden Berghe, Tom
    Hulpiau, Paco
    Martens, Liesbet
    Vandenbroucke, Roosmarijn E.
    Van Wonterghem, Elien
    Perry, Seth W.
    Bruggeman, Inge
    Divert, Tatyana
    Choi, Sze Men
    Vuylsteke, Marnik
    Shestopalov, Valery I.
    Libert, Claude
    Vandenabeele, Peter
    [J]. IMMUNITY, 2015, 43 (01) : 200 - 209
  • [106] Genetic association of molecular traits: A help to identify causative variants in complex diseases
    Vandiedonck, C.
    [J]. CLINICAL GENETICS, 2018, 93 (03) : 520 - 532
  • [107] Isolation and characterization of MC3T3-E1 preosteoblast subclones with distinct in vitro and in vivo differentiation mineralization potential
    Wang, D
    Christensen, K
    Chawla, K
    Xiao, GZ
    Krebsbach, PH
    Franceschi, RT
    [J]. JOURNAL OF BONE AND MINERAL RESEARCH, 1999, 14 (06) : 893 - 903
  • [108] Long noncoding RNAs and human disease
    Wapinski, Orly
    Chang, Howard Y.
    [J]. TRENDS IN CELL BIOLOGY, 2011, 21 (06) : 354 - 361
  • [109] Initial sequencing and comparative analysis of the mouse genome
    Waterston, RH
    Lindblad-Toh, K
    Birney, E
    Rogers, J
    Abril, JF
    Agarwal, P
    Agarwala, R
    Ainscough, R
    Alexandersson, M
    An, P
    Antonarakis, SE
    Attwood, J
    Baertsch, R
    Bailey, J
    Barlow, K
    Beck, S
    Berry, E
    Birren, B
    Bloom, T
    Bork, P
    Botcherby, M
    Bray, N
    Brent, MR
    Brown, DG
    Brown, SD
    Bult, C
    Burton, J
    Butler, J
    Campbell, RD
    Carninci, P
    Cawley, S
    Chiaromonte, F
    Chinwalla, AT
    Church, DM
    Clamp, M
    Clee, C
    Collins, FS
    Cook, LL
    Copley, RR
    Coulson, A
    Couronne, O
    Cuff, J
    Curwen, V
    Cutts, T
    Daly, M
    David, R
    Davies, J
    Delehaunty, KD
    Deri, J
    Dermitzakis, ET
    [J]. NATURE, 2002, 420 (6915) : 520 - 562
  • [110] Quantitative X-ray microradiography for high-throughput phenotyping of osteoarthritis in mice
    Waung, J. A.
    Maynard, S. A.
    Gopal, S.
    Gogakos, A.
    Logan, J. G.
    Williams, G. R.
    Bassett, J. H. D.
    [J]. OSTEOARTHRITIS AND CARTILAGE, 2014, 22 (10) : 1396 - 1400