New genetic loci implicated in fasting glucose homeostasis and their impact on type 2 diabetes risk

被引:1685
作者
Dupuis, Josee [2 ,3 ]
Langenberg, Claudia [4 ]
Prokopenko, Inga [5 ,6 ]
Saxena, Richa [7 ,8 ]
Soranzo, Nicole [9 ,10 ]
Jackson, Anne U. [1 ]
Wheeler, Eleanor [11 ]
Glazer, Nicole L. [12 ,13 ]
Bouatia-Naji, Nabila [14 ]
Gloyn, Anna L. [5 ]
Lindgren, Cecilia M. [5 ,6 ]
Magi, Reedik [5 ,6 ]
Morris, Andrew P. [6 ]
Randall, Joshua [6 ]
Johnson, Toby [15 ,16 ,17 ]
Elliott, Paul [18 ,173 ]
Rybin, Denis [19 ]
Thorleifsson, Gudmar [20 ]
Steinthorsdottir, Valgerdur [20 ]
Henneman, Peter [21 ]
Grallert, Harald [22 ]
Dehghan, Abbas [23 ]
Hottenga, Jouke Jan [24 ]
Franklin, Christopher S. [25 ]
Navarro, Pau [26 ]
Song, Kijoung [27 ]
Goel, Anuj [6 ,28 ]
Perry, John R. B. [29 ]
Egan, Josephine M.
Lajunen, Taina [31 ]
Grarup, Niels [32 ]
Sparso, Thomas [32 ]
Doney, Alex [33 ]
Voight, Benjamin F. [7 ,8 ]
Stringham, Heather M. [1 ]
Li, Man [34 ]
Kanoni, Stavroula [35 ]
Shrader, Peter [36 ]
Cavalcanti-Proenca, Christine [14 ]
Kumari, Meena [37 ]
Qi, Lu [38 ,39 ]
Timpson, Nicholas J. [40 ]
Gieger, Christian [22 ]
Zabena, Carina [41 ]
Rocheleau, Ghislain [42 ,43 ,44 ]
Ingelsson, Erik [45 ,46 ]
An, Ping [47 ]
O'Connell, Jeffrey [48 ]
Luan, Jian'an [4 ]
Elliott, Amanda [7 ,8 ]
机构
[1] Univ Michigan, Sch Publ Hlth, Dept Biostat, Ctr Stat Genet, Ann Arbor, MI 48109 USA
[2] Boston Univ, Sch Publ Hlth, Dept Biostat, Boston, MA USA
[3] Natl Heart Lung & Blood Inst Framingham Heart Stu, Framingham, MA USA
[4] Addenbrookes Hosp, Inst Metab Sci, Epidemiol Unit, MRC, Cambridge, England
[5] Univ Oxford, Oxford Ctr Diabet Endocrinol & Metab, Oxford, England
[6] Univ Oxford, Wellcome Trust Ctr Human Genet, Oxford, England
[7] Broad Inst, Program Med & Populat Genet, Cambridge, MA USA
[8] Massachusetts Gen Hosp, Ctr Human Genet Res, Boston, MA 02114 USA
[9] Wellcome Trust Sanger Inst, Cambridge, England
[10] Kings Coll London, Twin Res & Genet Epidemiol Dept, London WC2R 2LS, England
[11] Wellcome Trust Sanger Inst, Metab Dis Grp, Cambridge, England
[12] Univ Washington, Cardiovasc Hlth Res Unit, Seattle, WA 98195 USA
[13] Univ Washington, Dept Med, Seattle, WA USA
[14] Univ Lille 2, Inst Pasteur, CNRS, Unite Mixte Rech 8090, Lille, France
[15] Univ Lausanne, Dept Med Genet, Lausanne, Switzerland
[16] CHU Vaudois, Univ Inst Social & Preventat Med, CH-1011 Lausanne, Switzerland
[17] Swiss Inst Bioinformat, Lausanne, Switzerland
[18] Univ London Imperial Coll Sci Technol & Med, Fac Med, Dept Epidemiol & Publ Hlth, London, England
[19] Boston Univ, Data Coordinating Ctr, Boston, MA 02215 USA
[20] deCODE Genet, Reykjavik, Iceland
[21] Leiden Univ, Dept Human Genet, Med Ctr, NL-2300 RA Leiden, Netherlands
[22] German Res Ctr Environm Hlth, Helmholtz Zentrum Muenchen, Inst Epidemiol, Neuherberg, Germany
[23] Erasmus Med Coll, Dept Epidemiol, Rotterdam, Netherlands
[24] Vrije Univ Amsterdam, Dept Biol Psychol, Amsterdam, Netherlands
[25] Univ Edinburgh, Ctr Populat Hlth Sci, Edinburgh, Midlothian, Scotland
[26] Inst Genet & Mol Med, MRC, Human Genet Unit, Edinburgh, Midlothian, Scotland
[27] GlaxoSmithKline, Div Genet Res & Dev, King Of Prussia, PA USA
[28] Univ Oxford, Dept Cardiovasc Med, Oxford, England
[29] Univ Exeter, Peninsula Coll Med & Dent, Inst Biomed & Clin Sci, Exeter, Devon, England
[30] NIA, Longitudinal Studies Sect, Clin Res Branch, NIH, Baltimore, MD 21224 USA
[31] Univ Oulu, Bioctr, Natl Inst Hlth & Welf, Unit Child & Adolescent Hlth & Welf, Oulu, Finland
[32] Hagedorn Res Inst, Gentofte, Denmark
[33] Univ Dundee, Ninewells Hosp & Med Sch, Dept Med & Therapeut, Level 7, Dundee DD1 9SY, Scotland
[34] Johns Hopkins Univ, Bloomberg Sch Publ Hlth, Dept Epidemiol, Baltimore, MD USA
[35] Harokopio Univ, Dept Nutr Dietet, Athens, Greece
[36] Massachusetts Gen Hosp, Div Gen Med, Boston, MA 02114 USA
[37] UCL, Dept Epidemiol & Publ Hlth, London, England
[38] Harvard Univ, Sch Publ Hlth, Dept Nutr, Boston, MA 02115 USA
[39] Harvard Univ, Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
[40] Univ Bristol, MRC, Ctr Causal Anal Translat Epidemiol, Bristol, Avon, England
[41] Hosp Clin San Carlos, Fdn Invest Biomed, Madrid, Spain
[42] McGill Univ, Dept Med, Montreal, PQ, Canada
[43] McGill Univ, Dept Human Genet, Montreal, PQ, Canada
[44] Genome Quebec Innovat Ctr, Montreal, PQ, Canada
[45] Karolinska Inst, Dept Med Epidemiol & Biostat, Stockholm, Sweden
[46] Uppsala Univ, Dept Publ Hlth & Caring Sci, Uppsala, Sweden
[47] Washington Univ, Sch Med, Dept Genet, Div Stat Genom, St Louis, MO 63110 USA
[48] Univ Maryland, Sch Med, Div Endocrinol Diabet & Nutr, Baltimore, MD 21201 USA
[49] Univ Lille Nord France, INSERM, U859, Lille, France
[50] NHGRI, Genome Technol Branch, Bethesda, MD 20892 USA
基金
英国医学研究理事会; 英国惠康基金;
关键词
GENOME-WIDE ASSOCIATION; BETA-CELL DYSFUNCTION; PLASMA-GLUCOSE; INSULIN-RESISTANCE; ESSENTIAL COMPONENTS; TRIGLYCERIDE LEVELS; MODEL ASSESSMENT; CIRCADIAN CLOCK; DISEASE RISK; FOLLOW-UP;
D O I
10.1038/ng.520
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Levels of circulating glucose are tightly regulated. To identify new loci influencing glycemic traits, we performed meta-analyses of 21 genome-wide association studies informative for fasting glucose, fasting insulin and indices of beta-cell function (HOMA-B) and insulin resistance (HOMA-IR) in up to 46,186 nondiabetic participants. Follow-up of 25 loci in up to 76,558 additional subjects identified 16 loci associated with fasting glucose and HOMA-B and two loci associated with fasting insulin and HOMA-IR. These include nine loci newly associated with fasting glucose (in or near ADCY5, MADD, ADRA2A, CRY2, FADS1, GLIS3, SLC2A2, PROX1 and C2CD4B) and one influencing fasting insulin and HOMA-IR (near IGF1). We also demonstrated association of ADCY5, PROX1, GCK, GCKR and DGKB-TMEM195 with type 2 diabetes. Within these loci, likely biological candidate genes influence signal transduction, cell proliferation, development, glucose-sensing and circadian regulation. Our results demonstrate that genetic studies of glycemic traits can identify type 2 diabetes risk loci, as well as loci containing gene variants that are associated with a modest elevation in glucose levels but are not associated with overt diabetes.
引用
收藏
页码:105 / U32
页数:15
相关论文
共 74 条
  • [1] [Anonymous], 2007, R LANG ENV STAT COMP
  • [2] GenABEL: an R library for genome-wide association analysis
    Aulchenko, Yurii S.
    Ripke, Stephan
    Isaacs, Aaron
    Van Duijn, Cornelia M.
    [J]. BIOINFORMATICS, 2007, 23 (10) : 1294 - 1296
  • [3] Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts
    Aulchenko, Yurii S.
    Ripatti, Samuli
    Lindqvist, Ida
    Boomsma, Dorret
    Heid, Iris M.
    Pramstaller, Peter P.
    Penninx, Brenda W. J. H.
    Janssens, A. Cecile J. W.
    Wilson, James F.
    Spector, Tim
    Martin, Nicholas G.
    Pedersen, Nancy L.
    Kyvik, Kirsten Ohm
    Kaprio, Jaakko
    Hofman, Albert
    Freimer, Nelson B.
    Jarvelin, Marjo-Riitta
    Gyllensten, Ulf
    Campbell, Harry
    Rudan, Igor
    Johansson, Asa
    Marroni, Fabio
    Hayward, Caroline
    Vitart, Veronique
    Jonasson, Inger
    Pattaro, Cristian
    Wright, Alan
    Hastie, Nick
    Pichler, Irene
    Hicks, Andrew A.
    Falchi, Mario
    Willemsen, Gonneke
    Hottenga, Jouke-Jan
    de Geus, Eco J. C.
    Montgomery, Grant W.
    Whitfield, John
    Magnusson, Patrik
    Saharinen, Juha
    Perola, Markus
    Silander, Kaisa
    Isaacs, Aaron
    Sijbrands, Eric J. G.
    Uitterlinden, Andre G.
    Witteman, Jacqueline C. M.
    Oostra, Ben A.
    Elliott, Paul
    Ruokonen, Aimo
    Sabatti, Chiara
    Gieger, Christian
    Meitinger, Thomas
    [J]. NATURE GENETICS, 2009, 41 (01) : 47 - 55
  • [4] The P446L variant in GCKR associated with fasting plasma glucose and triglyceride levels exerts its effect through increased glucokinase activity in liver
    Beer, Nicola L.
    Tribble, Nicholas D.
    McCulloch, Laura J.
    Roos, Charlotta
    Johnson, Paul R. V.
    Orho-Melander, Marju
    Gloyn, Anna L.
    [J]. HUMAN MOLECULAR GENETICS, 2009, 18 (21) : 4081 - 4088
  • [5] Minimal model-based insulin sensitivity has greater heritability and a different genetic basis than homeostasis model assessment or fasting insulin
    Bergman, RN
    Zaccaro, DJ
    Watanabe, RM
    Haffner, SM
    Saad, MF
    Norris, JM
    Wagenknecht, LE
    Hokanson, JE
    Rotter, JI
    Rich, SS
    [J]. DIABETES, 2003, 52 (08) : 2168 - 2174
  • [6] A polymorphism within the G6PC2 gene is associated with fasting plasma glucose levels
    Bouatia-Naji, Nabila
    Rocheleau, Ghislain
    Van Lommel, Leentje
    Lemaire, Katleen
    Schuit, Frans
    Cavalcanti-Proenca, Christine
    Marchand, Marion
    Hartikainen, Anna-Liisa
    Sovio, Ulla
    De Graeve, Franck
    Rung, Johan
    Vaxillaire, Martine
    Tichet, Jean
    Marre, Michel
    Balkau, Beverley
    Weill, Jacques
    Elliott, Paul
    Jarvelin, Marjo-Riitta
    Meyre, David
    Polychronakos, Constantin
    Dina, Christian
    Sladek, Robert
    Froguel, Philippe
    [J]. SCIENCE, 2008, 320 (5879) : 1085 - 1088
  • [7] A variant near MTNR1B is associated with increased fasting plasma glucose levels and type 2 diabetes risk
    Bouatia-Naji, Nabila
    Bonnefond, Amelie
    Cavalcanti-Proenca, Christine
    Sparso, Thomas
    Holmkvist, Johan
    Marchand, Marion
    Delplanque, Jerome
    Lobbens, Stephane
    Rocheleau, Ghislain
    Durand, Emmanuelle
    De Graeve, Franck
    Chevre, Jean-Claude
    Borch-Johnsen, Knut
    Hartikainen, Anna-Liisa
    Ruokonen, Aimo
    Tichet, Jean
    Marre, Michel
    Weill, Jacques
    Heude, Barbara
    Tauber, Maithe
    Lemaire, Katleen
    Schuit, Frans
    Elliott, Paul
    Jorgensen, Torben
    Charpentier, Guillaume
    Hadjadj, Samy
    Cauchi, Stephane
    Vaxillaire, Martine
    Sladek, Robert
    Visvikis-Siest, Sophie
    Balkau, Beverley
    Levy-Marchal, Claire
    Pattou, Francois
    Meyre, David
    Blakemore, Alexandra I. F.
    Jarvelin, Marjo-Riita
    Walley, Andrew J.
    Hansen, Torben
    Dina, Christian
    Pedersen, Oluf
    Froguel, Philippe
    [J]. NATURE GENETICS, 2009, 41 (01) : 89 - 94
  • [8] RELATIONSHIPS BETWEEN FASTING PLASMA GLUCOSE LEVELS AND INSULIN-SECRETION DURING INTRAVENOUS GLUCOSE-TOLERANCE TESTS
    BRUNZELL, JD
    ROBERTSON, RP
    LERNER, RL
    HAZZARD, WR
    ENSINCK, JW
    BIERMAN, EL
    PORTE, D
    [J]. JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM, 1976, 42 (02) : 222 - 229
  • [9] Variations in the G6PC2/ABCB11 genomic region are associated with fasting glucose levels
    Chen, Wei-Min
    Erdos, Michael R.
    Jackson, Anne U.
    Saxena, Richa
    Sanna, Serena
    Silver, Kristi D.
    Timpson, Nicholas J.
    Hansen, Torben
    Orru, Marco
    Piras, Maria Grazia
    Bonnycastle, Lori L.
    Willer, Cristen J.
    Lyssenko, Valeriya
    Shen, Haiqing
    Kuusisto, Johanna
    Ebrahim, Shah
    Sestu, Natascia
    Duren, William L.
    Spada, Maria Cristina
    Stringham, Heather M.
    Scott, Laura J.
    Olla, Nazario
    Swift, Amy J.
    Najjar, Samer
    Mitchell, Braxton D.
    Lawlor, Debbie A.
    Smith, George Davey
    Ben-Shlomo, Yoav
    Andersen, Gitte
    Borch-Johnsen, Knut
    Jorgensen, Torben
    Saramies, Jouko
    Valle, Timo T.
    Buchanan, Thomas A.
    Shuldiner, Alan R.
    Lakatta, Edward
    Bergman, Richard N.
    Uda, Manuela
    Tuomilehto, Jaakko
    Pedersen, Oluf
    Cao, Antonio
    Groop, Leif
    Mohlke, Karen L.
    Laakso, Markku
    Schlessinger, David
    Collins, Francis S.
    Altshuler, David
    Abecasis, Goncalo R.
    Boehnke, Michael
    Scuteri, Angelo
    [J]. JOURNAL OF CLINICAL INVESTIGATION, 2008, 118 (07) : 2620 - 2628
  • [10] Role of insulin-like growth factor I in maintaining normal glucose homeostasis
    Clemmons, DR
    [J]. HORMONE RESEARCH, 2004, 62 : 77 - 82